Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10190730	0.85[CEU][hapmap];0.86[CHB][hapmap]
rs10928117	0.91[ASN][1000 genomes]
rs12464970	0.81[ASN][1000 genomes]
rs12992419	0.82[CEU][hapmap]
rs12993814	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13008705	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs13018092	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1370329	1.00[CEU][hapmap];0.96[EUR][1000 genomes]
rs17736712	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs17744874	1.00[CHB][hapmap];0.89[ASN][1000 genomes]
rs17800425	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1898426	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2890601	0.85[CHB][hapmap]
rs35277594	0.96[EUR][1000 genomes]
rs355561	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap]
rs355563	1.00[JPT][hapmap]
rs355565	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap]
rs355587	0.84[CHB][hapmap]
rs355596	0.85[CEU][hapmap]
rs35919147	0.96[EUR][1000 genomes]
rs4954921	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6727219	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs71348769	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583214	chr2:142299923-142458316	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
2	nsv834394	chr2:142430225-142593264	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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