Variant report

Variant rs13096406
Chromosome Location chr3:49209058-49209059
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49208200-49209200 Flanking Active TSS HMEC breast
2 chr3:49208200-49209800 Flanking Active TSS Dnd41 blood
3 chr3:49208200-49210000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr3:49208200-49210200 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr3:49208200-49210400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr3:49208200-49211200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr3:49208200-49211400 Flanking Active TSS Adipose Nuclei Adipose
8 chr3:49208200-49212000 Flanking Active TSS Brain Germinal Matrix brain
9 chr3:49208400-49209200 Active TSS HUES6 Cell Line embryonic stem cell
10 chr3:49208400-49209200 Flanking Active TSS Primary T cells fromperipheralblood blood
11 chr3:49208400-49209200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
12 chr3:49208400-49209200 Active TSS Hela-S3 cervix
13 chr3:49208400-49209400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
14 chr3:49208400-49209400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
15 chr3:49208400-49209600 Active TSS H9 Cell Line embryonic stem cell
16 chr3:49208400-49209600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr3:49208400-49209600 Active TSS HUES48 Cell Line embryonic stem cell
18 chr3:49208400-49209600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
19 chr3:49208400-49209600 Active TSS Duodenum Smooth Muscle Duodenum
20 chr3:49208400-49209600 Active TSS Psoas Muscle Psoas
21 chr3:49208400-49209600 Active TSS HSMMtube muscle
22 chr3:49208400-49209800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
23 chr3:49208400-49209800 Bivalent/Poised TSS Brain Cingulate Gyrus brain
24 chr3:49208400-49209800 Active TSS Brain Substantia Nigra brain
25 chr3:49208400-49209800 Flanking Active TSS Fetal Thymus thymus
26 chr3:49208400-49209800 Active TSS Right Ventricle heart
27 chr3:49208400-49209800 Active TSS A549 lung
28 chr3:49208400-49210000 Active TSS HUES64 Cell Line embryonic stem cell
29 chr3:49208400-49210000 Active TSS Pancreatic Islets Pancreatic Islet
30 chr3:49208400-49210000 Active TSS Ovary ovary
31 chr3:49208400-49210200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
32 chr3:49208400-49210200 Flanking Active TSS Liver Liver
33 chr3:49208400-49210200 Active TSS Small Intestine intestine
34 chr3:49208400-49210400 Active TSS iPS-20b Cell Line embryonic stem cell
35 chr3:49208400-49210600 Active TSS Fetal Kidney kidney
36 chr3:49208600-49209200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr3:49208600-49209200 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr3:49208600-49209200 Active TSS iPS-18 Cell Line embryonic stem cell
39 chr3:49208600-49209200 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr3:49208600-49209200 Active TSS Primary monocytes fromperipheralblood blood
41 chr3:49208600-49209200 Active TSS Primary T cells from cord blood blood
42 chr3:49208600-49209200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
43 chr3:49208600-49209200 Active TSS Primary T helper naive cells from peripheral blood blood
44 chr3:49208600-49209200 Active TSS Primary T helper naive cells fromperipheralblood blood
45 chr3:49208600-49209200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
46 chr3:49208600-49209200 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr3:49208600-49209200 Active TSS Cortex derived primary cultured neurospheres brain
48 chr3:49208600-49209200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:49208600-49209200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
50 chr3:49208600-49209200 Active TSS Duodenum Mucosa Duodenum

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