Variant report
| Variant | rs34509487 |
|---|---|
| Chromosome Location | chr3:48964108-48964109 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:48957200-48965000 | Weak transcription | Small Intestine | intestine |
| 2 | chr3:48957400-49003800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr3:48957600-48964400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 4 | chr3:48957600-48964400 | Weak transcription | HSMMtube | muscle |
| 5 | chr3:48957600-48965000 | Weak transcription | Fetal Kidney | kidney |
| 6 | chr3:48957600-48974400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 7 | chr3:48957800-48964600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 8 | chr3:48957800-48964600 | Weak transcription | Aorta | Aorta |
| 9 | chr3:48957800-48965000 | Weak transcription | Right Ventricle | heart |
| 10 | chr3:48958000-48964400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 11 | chr3:48958000-48964400 | Weak transcription | Stomach Mucosa | stomach |
| 12 | chr3:48958000-48965000 | Weak transcription | Fetal Brain Male | brain |
| 13 | chr3:48958800-48965400 | Strong transcription | Fetal Intestine Small | intestine |
| 14 | chr3:48959000-48965200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 15 | chr3:48959000-48965200 | Strong transcription | Fetal Stomach | stomach |
| 16 | chr3:48959000-48968400 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr3:48959000-48971600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 18 | chr3:48959000-48974000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr3:48959000-48976000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 20 | chr3:48959000-48976200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 21 | chr3:48959200-48964200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 22 | chr3:48959200-48964800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 23 | chr3:48959200-48965000 | Strong transcription | Primary B cells from peripheral blood | blood |
| 24 | chr3:48959200-48968200 | Strong transcription | Thymus | Thymus |
| 25 | chr3:48959200-48971000 | Strong transcription | Fetal Muscle Leg | muscle |
| 26 | chr3:48959200-48973600 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 27 | chr3:48959400-48964600 | Weak transcription | Gastric | stomach |
| 28 | chr3:48959400-48965400 | Strong transcription | Brain Germinal Matrix | brain |
| 29 | chr3:48959400-48968200 | Strong transcription | Fetal Intestine Large | intestine |
| 30 | chr3:48959400-48976200 | Strong transcription | Fetal Thymus | thymus |
| 31 | chr3:48959600-48964200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 32 | chr3:48959600-48964200 | Strong transcription | Duodenum Mucosa | Duodenum |
| 33 | chr3:48959600-48964200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 34 | chr3:48959600-48964200 | Strong transcription | Osteobl | bone |
| 35 | chr3:48959600-48964600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 36 | chr3:48959600-48967200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 37 | chr3:48959600-48975800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 38 | chr3:48959800-48964200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 39 | chr3:48959800-48964200 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 40 | chr3:48959800-48964600 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 41 | chr3:48959800-48964600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 42 | chr3:48959800-48968200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr3:48960000-48964200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 44 | chr3:48960000-48964200 | Strong transcription | Primary T helper cells PMA-I stimulated | -- |
| 45 | chr3:48960000-48964200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 46 | chr3:48960000-48964200 | Weak transcription | HepG2 | liver |
| 47 | chr3:48960000-48964200 | Weak transcription | K562 | blood |
| 48 | chr3:48960000-48964600 | Weak transcription | Psoas Muscle | Psoas |
| 49 | chr3:48960000-48964600 | Strong transcription | Dnd41 | blood |
| 50 | chr3:48960000-48964800 | Weak transcription | Right Atrium | heart |
