Variant report

Variant	rs13316620
Chromosome Location	chr3:49045355-49045356
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:49043979-49045739	H1-neurons	neurons:	n/a	n/a
2	POLR2A	chr3:49044338-49046361	GM12878	blood:	n/a	n/a
3	MYC	chr3:49044444-49045528	K562	blood:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
4	POLR2A	chr3:49044268-49045480	PFSK-1	brain:	n/a	n/a
5	POLR2A	chr3:49043678-49045634	ECC-1	luminal epithelium:	n/a	n/a
6	SMARCB1	chr3:49043973-49045607	Hela-S3	cervix:	n/a	n/a
7	HDAC2	chr3:49045099-49045404	K562	blood:	n/a	n/a
8	TBP	chr3:49044411-49045533	H1-hESC	embryonic stem cell:	n/a	n/a
9	TCF12	chr3:49044041-49045443	ECC-1	luminal epithelium:	n/a	n/a
10	POLR2A	chr3:49044391-49046206	MCF10A-Er-Src	breast:	n/a	n/a
11	POLR2A	chr3:49043107-49045896	U87	brain:	n/a	n/a
12	HMGN3	chr3:49044159-49045562	K562	blood:	n/a	n/a
13	PML	chr3:49044359-49045454	MCF-7	breast:	n/a	n/a
14	MAX	chr3:49043811-49045525	ECC-1	luminal epithelium:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
15	POLR2A	chr3:49043815-49046234	GM12878	blood:	n/a	n/a
16	EGR1	chr3:49045085-49045555	MCF-7	breast:	n/a	chr3:49045255-49045268 chr3:49045353-49045368 chr3:49045284-49045299 chr3:49045256-49045267 chr3:49045286-49045300 chr3:49045256-49045270
17	ZBTB7A	chr3:49045161-49045699	K562	blood:	n/a	n/a
18	YY1	chr3:49044470-49045368	K562	blood:	n/a	chr3:49045111-49045119 chr3:49045257-49045266
19	YY1	chr3:49044422-49045403	ECC-1	luminal epithelium:	n/a	chr3:49045111-49045119 chr3:49045257-49045266
20	POLR2A	chr3:49043756-49046262	GM12892	blood:	n/a	n/a
21	POLR2A	chr3:49043930-49045392	PFSK-1	brain:	n/a	n/a
22	YY1	chr3:49044080-49045567	HepG2	liver:	n/a	chr3:49045111-49045119 chr3:49045257-49045266
23	POLR2A	chr3:49043830-49046254	GM12892	blood:	n/a	n/a
24	POLR2A	chr3:49043965-49045653	GM18505	blood:	n/a	n/a
25	MAX	chr3:49043803-49045551	A549	lung:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
26	MAX	chr3:49044353-49045481	H1-hESC	embryonic stem cell:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
27	RUNX3	chr3:49044191-49045508	GM12878	blood:	n/a	n/a
28	POLR2A	chr3:49043863-49045625	GM12878	blood:	n/a	n/a
29	MYC	chr3:49044592-49045544	MCF-7	breast:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
30	POLR2A	chr3:49043991-49045411	HUVEC	blood vessel:	n/a	n/a
31	EGR1	chr3:49044217-49045977	HCT-116	colon:	n/a	chr3:49044639-49044653 chr3:49044638-49044651 chr3:49045255-49045268 chr3:49044638-49044651 chr3:49045353-49045368 chr3:49045284-49045299 chr3:49045256-49045267 chr3:49045286-49045300 chr3:49044637-49044652 chr3:49045256-49045270
32	GATA3	chr3:49044414-49045376	MCF-7	breast:	n/a	chr3:49044969-49044977
33	CEBPD	chr3:49045173-49045461	HepG2	liver:	n/a	n/a
34	RCOR1	chr3:49044379-49045581	K562	blood:	n/a	n/a
35	MYC	chr3:49044183-49045467	K562	blood:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
36	MAX	chr3:49043736-49045578	K562	blood:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
37	POLR2A	chr3:49043078-49046354	H1-hESC	embryonic stem cell:	n/a	n/a
38	JUND	chr3:49043996-49045565	K562	blood:	n/a	chr3:49045357-49045366
39	POLR2A	chr3:49043962-49045369	GM12878	blood:	n/a	n/a
40	POLR2A	chr3:49043755-49046396	GM12892	blood:	n/a	n/a
41	MAX	chr3:49044448-49045591	K562	blood:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
42	POLR2A	chr3:49044396-49045536	K562	blood:	n/a	n/a
43	POLR2A	chr3:49044401-49045681	Raji	blood:	n/a	n/a
44	POLR2A	chr3:49043533-49045852	MCF-7	breast:	n/a	n/a
45	POLR2A	chr3:49043928-49045537	Hela-S3	cervix:	n/a	n/a
46	CREB1	chr3:49043989-49045719	H1-hESC	embryonic stem cell:	n/a	n/a
47	POLR2A	chr3:49044133-49045370	GM18951	blood:	n/a	n/a
48	MAX	chr3:49043822-49045453	HepG2	liver:	n/a	chr3:49044634-49044643 chr3:49045139-49045149
49	POLR2A	chr3:49043274-49046225	H1-hESC	embryonic stem cell:	n/a	n/a
50	POLR2A	chr3:49044375-49045408	HCT-116	colon:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:49045335-49045385	HEK293	kidney:	embryo
2	chr3:49045335-49045385	Caco-2	colon:	n/a
3	chr3:49045335-49045385	SKMC	muscle:	n/a
4	chr3:49045335-49045385	GM12878	blood:	n/a
5	chr3:49045335-49045385	PrEC	prostate:	n/a
6	chr3:49045335-49045385	ovcar-3	ovarian:	n/a
7	chr3:49045335-49045385	Hepatocyte	liver:	n/a
8	chr3:49045335-49045385	HRPEpiC	eye:	n/a
9	chr3:49045335-49045385	BE2_C	brain:	n/a
10	chr3:49045335-49045385	NHDF-neo	bronchial:	n/a
11	chr3:49045335-49045385	AoSMC	blood vessel:	n/a
12	chr3:49045335-49045385	HCF	heart:	n/a
13	chr3:49045335-49045385	HNPCEpiC	eye:	n/a
14	chr3:49045335-49045385	HRE	kidney:	n/a
15	chr3:49045335-49045385	NH-A	brain:	n/a
16	chr3:49045335-49045385	AG09309	skin:	n/a
17	chr3:49045335-49045385	AG10803	skin:	n/a
18	chr3:49045335-49045385	K562	blood:	n/a
19	chr3:49045335-49045385	SK-N-SH	brain:	n/a
20	chr3:49045335-49045385	HL-60	blood:	n/a
21	chr3:49045335-49045385	A549	lung:	n/a
22	chr3:49045335-49045385	CMK	blood:	n/a
23	chr3:49045335-49045385	AG09319	gingival:	n/a
24	chr3:49045335-49045385	HEEpiC	esophagus:	n/a
25	chr3:49045335-49045385	GM19239	blood:	n/a
26	chr3:49045335-49045385	GM12892	blood:	n/a
27	chr3:49045335-49045385	HRCEpiC	kidney:	n/a
28	chr3:49045335-49045385	GM06990	blood:	n/a
29	chr3:49045335-49045385	ProgFib	skin:	n/a
30	chr3:49045335-49045385	SK-N-SH_RA	brain:	n/a
31	chr3:49045335-49045385	HCPEpiC	choroid plexus:	n/a
32	chr3:49045335-49045385	T-47D	breast:	n/a
33	chr3:49045335-49045385	H1-hESC	embryonic stem cell:	embryo
34	chr3:49045335-49045385	AG04449	skin:	fetal
35	chr3:49045335-49045385	PFSK-1	brain:	n/a
36	chr3:49045335-49045385	NHBE	bronchial:	n/a
37	chr3:49045335-49045385	SK-N-MC	brain:	n/a
38	chr3:49045335-49045385	HepG2	liver:	n/a
39	chr3:49045335-49045385	LNCaP	prostate:	n/a
40	chr3:49045335-49045385	NT2-D1	testis:	n/a
41	chr3:49045335-49045385	HCM	heart:	n/a
42	chr3:49045335-49045385	HUVEC	blood vessel:	n/a
43	chr3:49045335-49045385	HCT-116	colon:	n/a
44	chr3:49045335-49045385	MCF10A-Er-Src	breast:	n/a
45	chr3:49045335-49045385	Hela-S3	cervix:	n/a
46	chr3:49045335-49045385	AG04450	lung:	fetal
47	chr3:49045335-49045385	BJ	skin:	n/a
48	chr3:49045335-49045385	HPAEpiC	pulmonary alveolar:	n/a
49	chr3:49045335-49045385	ECC-1	luminal epithelium:	n/a
50	chr3:49045335-49045385	RPTEC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:66139017..66139829-chr3:49044819..49045376,2	Hela-S3	cervix:
2	chr3:49043481..49046136-chr3:49130216..49133089,2	K562	blood:
3	chr3:49043383..49045852-chr3:49505855..49507402,2	MCF-7	breast:
4	chr3:49044794..49045446-chrX:77150667..77151418,2	Hela-S3	cervix:
5	chr3:49043476..49046691-chr3:49130841..49133756,3	K562	blood:
6	chr3:49043665..49045561-chr3:49710277..49712167,2	K562	blood:
7	chr3:48700630..48703207-chr3:49044613..49046334,2	K562	blood:
8	chr3:48753231..48756384-chr3:49043125..49045455,4	K562	blood:
9	chr12:57039439..57039958-chr3:49044659..49045399,2	Hela-S3	cervix:
10	chr3:48954616..48957728-chr3:49043769..49045935,3	K562	blood:
11	chr3:49043286..49045415-chr3:49130113..49131659,2	MCF-7	breast:

Variant related genes	Relation type
WDR6	TF binding region
WDR6	CpG island
ENSG00000221883	Chromatin interaction
ENSG00000102158	Chromatin interaction
ENSG00000177479	Chromatin interaction
ENSG00000198218	Chromatin interaction
ENSG00000173402	Chromatin interaction
ENSG00000164062	Chromatin interaction
ENSG00000174669	Chromatin interaction
ENSG00000068745	Chromatin interaction
ENSG00000110955	Chromatin interaction
ENSG00000228350	Chromatin interaction

Extended variants
information (count: 117 )
Associated
traits (count: 25 )

rSNPs within LD-proxies of this variant (count:116)

rs_ID	r²[population]
rs10780033	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs11130176	0.84[EUR][1000 genomes]
rs11130184	0.80[CEU][hapmap]
rs1134591	0.96[CEU][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11705737	0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11705888	0.80[EUR][1000 genomes]
rs11706052	0.84[ASN][1000 genomes]
rs11712982	0.84[ASN][1000 genomes]
rs11715581	0.88[CEU][hapmap]
rs11717978	0.87[ASN][1000 genomes]
rs11719457	0.87[ASN][1000 genomes]
rs11920534	0.96[CEU][hapmap];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11924597	0.96[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12490393	0.88[CEU][hapmap]
rs12491743	0.87[EUR][1000 genomes]
rs12493001	0.92[CEU][hapmap]
rs12493289	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs12629759	0.80[CEU][hapmap]
rs12637037	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12637576	0.80[CEU][hapmap]
rs13064784	0.84[EUR][1000 genomes]
rs13064883	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13064911	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13072554	0.84[ASN][1000 genomes]
rs13072911	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13073997	0.82[ASN][1000 genomes]
rs13076394	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs13078308	0.81[EUR][1000 genomes]
rs13080725	0.84[ASN][1000 genomes]
rs13086240	0.89[ASN][1000 genomes]
rs13087930	0.87[ASN][1000 genomes]
rs13090839	0.84[ASN][1000 genomes]
rs13315711	0.96[CEU][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28642807	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3212	0.92[CEU][hapmap]
rs34477108	0.87[ASN][1000 genomes]
rs34504524	0.95[ASN][1000 genomes]
rs34509487	0.87[ASN][1000 genomes]
rs35108630	0.84[ASN][1000 genomes]
rs3923475	0.84[ASN][1000 genomes]
rs4072859	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4279134	0.92[CEU][hapmap]
rs4364202	0.81[AFR][1000 genomes]
rs4513485	0.92[CEU][hapmap]
rs4521268	0.92[CEU][hapmap]
rs4955410	0.92[CEU][hapmap]
rs4955418	0.88[CEU][hapmap]
rs4955419	0.88[CEU][hapmap]
rs4974078	0.80[ASN][1000 genomes]
rs4974079	0.96[CEU][hapmap];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4974080	0.96[CEU][hapmap];0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4974082	0.96[CEU][hapmap];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4974084	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4974085	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4974087	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs4974091	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55674449	0.80[ASN][1000 genomes]
rs56318350	0.87[ASN][1000 genomes]
rs62262517	0.80[EUR][1000 genomes]
rs6414613	0.96[CEU][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6446196	0.96[CEU][hapmap];0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6446198	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6446205	0.96[CEU][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6446252	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs6446253	0.96[CEU][hapmap];0.88[EUR][1000 genomes]
rs67060340	0.82[ASN][1000 genomes]
rs6768433	0.95[CEU][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6779394	0.92[CEU][hapmap];0.81[AFR][1000 genomes]
rs6781790	0.96[CEU][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6784111	0.92[CEU][hapmap]
rs6786665	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6789285	0.80[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs6791234	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6795025	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7372149	0.87[EUR][1000 genomes]
rs7373778	0.83[EUR][1000 genomes]
rs7373790	0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7430198	0.96[CEU][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7430501	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs7431710	0.96[CEU][hapmap];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7431857	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs7432989	0.96[CEU][hapmap];0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7612459	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7615235	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7615675	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7621015	0.96[CEU][hapmap];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7623023	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs7626445	0.96[CEU][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7627404	0.84[EUR][1000 genomes]
rs7628719	0.96[CEU][hapmap];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7636057	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7639332	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7643368	0.96[CEU][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7647093	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7649458	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs8926	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9311430	0.84[EUR][1000 genomes]
rs9311432	0.95[CEU][hapmap];0.84[EUR][1000 genomes]
rs9311433	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs9311434	0.96[CEU][hapmap];0.86[EUR][1000 genomes]
rs9637481	0.96[CEU][hapmap]
rs9681717	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9682444	0.96[CEU][hapmap];0.84[EUR][1000 genomes]
rs9754878	0.87[EUR][1000 genomes]
rs9755490	0.96[CEU][hapmap];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9830636	0.84[EUR][1000 genomes]
rs9835307	0.96[CEU][hapmap];0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9840050	0.96[CEU][hapmap];0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9840684	0.87[EUR][1000 genomes]
rs9841640	0.82[EUR][1000 genomes]
rs9846123	0.96[CEU][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs9850134	0.96[CEU][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9867373	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9876848	0.84[EUR][1000 genomes]
rs9879971	0.87[EUR][1000 genomes]
rs9884022	0.96[CEU][hapmap];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876764	chr3:49040462-49245645	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	279 gene(s)	inside rSNPs	diseases

mRNA abundance (count:25)

SNP	Gene	Cis/trans	Tissue	Source
rs13316620	AMT	cis	Thyroid	GTEx
rs13316620	NCKIPSD	cis	Muscle Skeletal	GTEx
rs13316620	WDR6	cis	Whole Blood	GTEx
rs13316620	WDR6	cis	Adipose Subcutaneous	GTEx
rs13316620	NICN1	cis	Thyroid	GTEx
rs13316620	CCDC36	cis	Esophagus Muscularis	GTEx
rs13316620	NCKIPSD	cis	Whole Blood	GTEx
rs13316620	WDR6	cis	Skin Sun Exposed Lower leg	GTEx
rs13316620	ARIH2	Cis_1M	lymphoblastoid	RTeQTL
rs13316620	NCKIPSD	cis	Esophagus Muscularis	GTEx
rs13316620	WDR6	cis	Artery Tibial	GTEx
rs13316620	WDR6	cis	Esophagus Muscularis	GTEx
rs13316620	AMT	cis	Whole Blood	GTEx
rs13316620	NICN1-AS1	cis	Thyroid	GTEx
rs13316620	WDR6	cis	lung	GTEx
rs13316620	NCKIPSD	cis	Nerve Tibial	GTEx
rs13316620	WDR6	cis	Heart Left Ventricle	GTEx
rs13316620	CCDC36	cis	Artery Tibial	GTEx
rs13316620	WDR6	cis	Stomach	GTEx
rs13316620	WDR6	cis	Esophagus Mucosa	GTEx
rs13316620	WDR6	cis	Muscle Skeletal	GTEx
rs13316620	WDR6	cis	Nerve Tibial	GTEx
rs13316620	AMT	cis	Muscle Skeletal	GTEx
rs13316620	WDR6	cis	uninvolved skin	skin_eQTL
rs13316620	PH-4	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49041000-49046200	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr3:49043400-49046200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr3:49043600-49045800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr3:49043600-49046000	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
5	chr3:49043600-49046200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr3:49043800-49045600	Active TSS	HUES48 Cell Line	embryonic stem cell
7	chr3:49043800-49045600	Active TSS	Fetal Lung	lung
8	chr3:49043800-49045600	Active TSS	HSMMtube	muscle
9	chr3:49043800-49045800	Active TSS	H9 Cell Line	embryonic stem cell
10	chr3:49043800-49045800	Active TSS	HUES64 Cell Line	embryonic stem cell
11	chr3:49043800-49046000	Flanking Active TSS	Adipose Nuclei	Adipose
12	chr3:49043800-49046000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
13	chr3:49043800-49046200	Flanking Active TSS	Primary B cells from cord blood	blood
14	chr3:49043800-49046200	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
15	chr3:49044000-49045600	Active TSS	iPS-15b Cell Line	embryonic stem cell
16	chr3:49044000-49045600	Active TSS	iPS-18 Cell Line	embryonic stem cell
17	chr3:49044000-49045600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr3:49044000-49045600	Active TSS	Brain Substantia Nigra	brain
19	chr3:49044000-49045600	Active TSS	Colon Smooth Muscle	Colon
20	chr3:49044000-49045600	Active TSS	Small Intestine	intestine
21	chr3:49044000-49045800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
22	chr3:49044000-49045800	Active TSS	Pancreatic Islets	Pancreatic Islet
23	chr3:49044000-49045800	Active TSS	Ovary	ovary
24	chr3:49044000-49046000	Active TSS	Fetal Kidney	kidney
25	chr3:49044000-49046200	Active TSS	ES-I3 Cell Line	embryonic stem cell
26	chr3:49044000-49046200	Active TSS	iPS-20b Cell Line	embryonic stem cell
27	chr3:49044200-49045400	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
28	chr3:49044200-49045400	Active TSS	Brain Anterior Caudate	brain
29	chr3:49044200-49045400	Active TSS	Duodenum Mucosa	Duodenum
30	chr3:49044200-49045400	Active TSS	Left Ventricle	heart
31	chr3:49044200-49045600	Active TSS	H1 Cell Line	embryonic stem cell
32	chr3:49044200-49045600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr3:49044200-49045600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr3:49044200-49045600	Active TSS	HUES6 Cell Line	embryonic stem cell
35	chr3:49044200-49045600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr3:49044200-49045600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
37	chr3:49044200-49045600	Active TSS	Breast Myoepithelial Primary Cells	Breast
38	chr3:49044200-49045600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr3:49044200-49045600	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
40	chr3:49044200-49045600	Active TSS	Aorta	Aorta
41	chr3:49044200-49045600	Active TSS	Brain Angular Gyrus	brain
42	chr3:49044200-49045600	Active TSS	Brain Cingulate Gyrus	brain
43	chr3:49044200-49045600	Active TSS	Brain Hippocampus Middle	brain
44	chr3:49044200-49045600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr3:49044200-49045600	Active TSS	Fetal Brain Female	brain
46	chr3:49044200-49045600	Active TSS	Fetal Heart	heart
47	chr3:49044200-49045600	Active TSS	Gastric	stomach
48	chr3:49044200-49045600	Active TSS	Lung	lung
49	chr3:49044200-49045600	Active TSS	Placenta Amnion	Placenta Amnion
50	chr3:49044200-49045600	Active TSS	Rectal Smooth Muscle	rectum

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