Variant report

Variant	rs4279134
Chromosome Location	chr3:49156676-49156677
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:0)
Chromatin interactive
region (count:15)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr3:49156663-49159063	SK-N-MC	brain:	n/a	n/a

No data

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:49065059..49067026-chr3:49155919..49158301,2	MCF-7	breast:
2	chr3:49056273..49062188-chr3:49155312..49159947,7	K562	blood:
3	chr3:49064025..49068089-chr3:49156559..49161197,7	MCF-7	breast:
4	chr3:49128926..49138937-chr3:49145476..49160975,31	K562	blood:
5	chr3:49141581..49143765-chr3:49156175..49158476,2	K562	blood:
6	chr3:49058620..49061371-chr3:49155094..49159079,3	MCF-7	breast:
7	chr3:49057812..49061431-chr3:49156444..49158785,4	K562	blood:
8	chr3:49129847..49133782-chr3:49155056..49162049,12	MCF-7	breast:
9	chr3:49151622..49155805-chr3:49155952..49160094,9	K562	blood:
10	chr3:49140522..49142254-chr3:49155638..49159426,3	MCF-7	breast:
11	chr3:49155392..49161176-chr3:49167558..49172640,8	MCF-7	breast:
12	chr3:49154967..49157191-chr3:49202240..49204149,2	MCF-7	breast:
13	chr3:49144707..49154191-chr3:49155059..49160099,12	MCF-7	breast:
14	chr3:49155018..49163811-chr3:49167026..49172599,15	MCF-7	breast:
15	chr3:49148095..49150298-chr3:49155546..49158481,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LAMB2-2	chr3:49156455-49156714	NONHSAT089667

No data

Variant related genes	Relation type
USP19	TF binding region
ENSG00000207605	Chromatin interaction
ENSG00000172037	Chromatin interaction
ENSG00000177352	Chromatin interaction
ENSG00000178149	Chromatin interaction
ENSG00000199032	Chromatin interaction
ENSG00000172046	Chromatin interaction
ENSG00000198218	Chromatin interaction
ENSG00000178035	Chromatin interaction
ENSG00000178057	Chromatin interaction
ENSG00000272434	Chromatin interaction
ENSG00000172053	Chromatin interaction

Extended variants
information (count: 112 )
Associated
traits (count: 37 )

rSNPs within LD-proxies of this variant (count:109)

rs_ID	r²[population]
rs10049462	1.00[JPT][hapmap]
rs10154895	0.85[ASN][1000 genomes]
rs10865954	0.84[ASW][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.90[ASN][1000 genomes]
rs11130182	0.83[ASN][1000 genomes]
rs11130184	0.89[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.86[TSI][hapmap];0.87[ASN][1000 genomes]
rs1134591	0.89[ASW][hapmap];0.96[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap]
rs11552724	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11706052	1.00[CHD][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs11706189	1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11712006	0.95[ASN][1000 genomes]
rs11713297	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs11715581	0.96[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11716334	0.87[ASN][1000 genomes]
rs11719220	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs11920267	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap]
rs12487580	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12490393	0.96[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12491743	0.83[AMR][1000 genomes]
rs12493001	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12629759	0.89[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap];0.87[ASN][1000 genomes]
rs12631989	0.92[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap]
rs12636030	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12637037	0.83[AFR][1000 genomes];0.80[EUR][1000 genomes]
rs12637576	0.89[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.86[TSI][hapmap]
rs13064784	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13068038	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs13072554	0.82[ASN][1000 genomes]
rs13077498	0.85[CHD][hapmap];1.00[JPT][hapmap]
rs13080725	0.82[ASN][1000 genomes]
rs13086240	1.00[JPT][hapmap]
rs13087930	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs13092715	0.89[ASW][hapmap];1.00[CHB][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap]
rs13315711	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[YRI][hapmap]
rs13316620	0.92[CEU][hapmap]
rs2117938	0.89[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap]
rs2304442	0.82[CHB][hapmap];0.85[CHD][hapmap];1.00[JPT][hapmap]
rs3212	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34326553	0.95[ASN][1000 genomes]
rs34566463	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs34580506	0.87[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs34889065	0.95[ASN][1000 genomes]
rs35060561	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs35108630	0.82[ASN][1000 genomes]
rs35174559	0.92[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.86[TSI][hapmap]
rs35283189	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs35673421	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs36133651	0.92[EUR][1000 genomes]
rs3774800	0.92[CEU][hapmap]
rs3923475	0.82[ASN][1000 genomes]
rs4308307	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4364202	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4499638	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4513485	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4521268	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4536858	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4955410	0.89[ASW][hapmap];1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4955418	0.96[CEU][hapmap];0.87[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.88[TSI][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4955419	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4955420	0.84[ASW][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.88[TSI][hapmap];0.87[ASN][1000 genomes]
rs4955432	0.89[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap]
rs4974078	0.85[CHB][hapmap];0.87[CHD][hapmap]
rs4974080	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap]
rs4974082	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap]
rs5030795	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs55713230	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs61583136	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62262517	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6414613	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.81[AFR][1000 genomes]
rs6446196	0.96[CEU][hapmap];0.81[GIH][hapmap];0.83[LWK][hapmap];0.88[MEX][hapmap];0.95[TSI][hapmap];0.85[YRI][hapmap]
rs6446205	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.89[YRI][hapmap]
rs66991555	0.90[ASN][1000 genomes]
rs6768433	0.95[CEU][hapmap]
rs6770112	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6772452	1.00[ASW][hapmap];0.95[LWK][hapmap];0.89[MKK][hapmap];1.00[YRI][hapmap]
rs6779394	1.00[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6781790	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap]
rs6784111	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6789285	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6790914	0.82[ASN][1000 genomes]
rs6795025	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7373790	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7430198	0.96[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.82[YRI][hapmap]
rs7432989	0.96[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.86[YRI][hapmap];0.87[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs7615235	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7621015	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap]
rs7626445	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7628719	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap]
rs7632267	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7643368	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap]
rs7645551	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7652746	0.89[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap]
rs9311439	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs9637481	0.96[CEU][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap]
rs9683094	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs9814987	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs9835439	0.85[ASN][1000 genomes]
rs9837237	1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs9837625	1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs9840050	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.95[LWK][hapmap];0.81[MEX][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap];0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9846123	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];0.97[TSI][hapmap];0.96[YRI][hapmap];0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs9847839	0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs9850134	0.89[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap]
rs9850917	1.00[JPT][hapmap]
rs9855123	0.85[ASN][1000 genomes]
rs9862483	0.85[ASN][1000 genomes]
rs9880088	1.00[CHD][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs9880309	1.00[JPT][hapmap]
rs9884022	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap]
rs9990153	1.00[CHD][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv876764	chr3:49040462-49245645	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	279 gene(s)	inside rSNPs	diseases
2	nsv834686	chr3:49106047-49270556	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
3	nsv876765	chr3:49119063-49160671	Weak transcription Active TSS Flanking Active TSS Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases

mRNA abundance (count:37)

SNP	Gene	Cis/trans	Tissue	Source
rs4279134	PH-4	Cis_1M	lymphoblastoid	RTeQTL
rs4279134	WDR6	cis	lung	GTEx
rs4279134	AMT	cis	Whole Blood	GTEx
rs4279134	WDR6	cis	cerebellum	SCAN
rs4279134	WDR6	cis	Esophagus Mucosa	GTEx
rs4279134	ARIH2	Cis_1M	lymphoblastoid	RTeQTL
rs4279134	DALRD3	cis	parietal	SCAN
rs4279134	AMT	cis	cerebellum	SCAN
rs4279134	WDR6	cis	Stomach	GTEx
rs4279134	TLR9	cis	parietal	SCAN
rs4279134	WDR6	cis	Muscle Skeletal	GTEx
rs4279134	NICN1-AS1	cis	Thyroid	GTEx
rs4279134	AMT	cis	Artery Aorta	GTEx
rs4279134	WDR6	cis	parietal	SCAN
rs4279134	NCKIPSD	cis	cerebellum	SCAN
rs4279134	AMT	cis	Thyroid	GTEx
rs4279134	NCKIPSD	cis	Whole Blood	GTEx
rs4279134	NCKIPSD	cis	parietal	SCAN
rs4279134	WDR6	cis	Esophagus Muscularis	GTEx
rs4279134	WDR6	cis	Whole Blood	GTEx
rs4279134	WDR6	cis	Skin Sun Exposed Lower leg	GTEx
rs4279134	CCDC36	cis	Artery Tibial	GTEx
rs4279134	NICN1	cis	Thyroid	GTEx
rs4279134	PHF7	cis	parietal	SCAN
rs4279134	P4HTM	cis	cerebellum	SCAN
rs4279134	WDR6	cis	Nerve Tibial	GTEx
rs4279134	P4HTM	cis	parietal	SCAN
rs4279134	AMT	cis	parietal	SCAN
rs4279134	WDR6	cis	lymphoblastoid	seeQTL
rs4279134	WDR6	cis	Artery Tibial	GTEx
rs4279134	AMT	cis	Muscle Skeletal	GTEx
rs4279134	DALRD3	cis	cerebellum	SCAN
rs4279134	CCDC71	cis	cerebellum	SCAN
rs4279134	WDR6	cis	Heart Left Ventricle	GTEx
rs4279134	NCKIPSD	cis	Nerve Tibial	GTEx
rs4279134	WDR6	cis	Adipose Subcutaneous	GTEx
rs4279134	NCKIPSD	cis	Muscle Skeletal	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:49142800-49157200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr3:49142800-49157600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr3:49143600-49156800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr3:49144000-49156800	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr3:49144200-49156800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr3:49144800-49156800	Strong transcription	HUES6 Cell Line	embryonic stem cell
7	chr3:49144800-49156800	Strong transcription	Primary monocytes fromperipheralblood	blood
8	chr3:49146400-49156800	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr3:49152600-49156800	Strong transcription	ES-I3 Cell Line	embryonic stem cell
10	chr3:49154200-49157000	Genic enhancers	Primary T cells fromperipheralblood	blood
11	chr3:49154800-49156800	Genic enhancers	Primary T killer memory cells from peripheral blood	blood
12	chr3:49154800-49157000	Genic enhancers	Primary T helper naive cells fromperipheralblood	blood
13	chr3:49155000-49156800	Genic enhancers	Colon Smooth Muscle	Colon
14	chr3:49155200-49156800	Genic enhancers	Brain Cingulate Gyrus	brain
15	chr3:49155600-49156800	Weak transcription	Small Intestine	intestine
16	chr3:49155600-49157000	Weak transcription	H9 Cell Line	embryonic stem cell
17	chr3:49155600-49157200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr3:49155600-49157200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr3:49155600-49157200	Weak transcription	Pancreatic Islets	Pancreatic Islet
20	chr3:49155800-49156800	Weak transcription	Placenta Amnion	Placenta Amnion
21	chr3:49155800-49157000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr3:49156000-49156800	Genic enhancers	Primary hematopoietic stem cells	blood
23	chr3:49156000-49156800	Weak transcription	Colonic Mucosa	Colon
24	chr3:49156000-49157000	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr3:49156000-49162600	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr3:49156200-49156800	Genic enhancers	Brain Anterior Caudate	brain
27	chr3:49156200-49156800	Transcr. at gene 5' and 3'	Brain Germinal Matrix	brain
28	chr3:49156200-49156800	Enhancers	Rectal Smooth Muscle	rectum
29	chr3:49156200-49157000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr3:49156200-49157000	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
31	chr3:49156200-49157000	Enhancers	HMEC	breast
32	chr3:49156200-49157200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
33	chr3:49156400-49156800	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr3:49156400-49156800	Genic enhancers	Primary B cells from peripheral blood	blood
35	chr3:49156400-49156800	Genic enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
36	chr3:49156400-49156800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
37	chr3:49156400-49156800	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr3:49156400-49156800	Genic enhancers	Primary mononuclear cells fromperipheralblood	Blood
39	chr3:49156400-49156800	Genic enhancers	Aorta	Aorta
40	chr3:49156400-49156800	Genic enhancers	Brain Inferior Temporal Lobe	brain
41	chr3:49156400-49156800	Weak transcription	Fetal Lung	lung
42	chr3:49156400-49156800	Weak transcription	Rectal Mucosa Donor 29	rectum
43	chr3:49156400-49156800	Genic enhancers	Spleen	Spleen
44	chr3:49156400-49156800	Enhancers	HSMMtube	muscle
45	chr3:49156400-49156800	Genic enhancers	NHEK	skin
46	chr3:49156400-49156800	Transcr. at gene 5' and 3'	NHLF	lung
47	chr3:49156400-49157000	Enhancers	Primary T helper naive cells from peripheral blood	blood
48	chr3:49156400-49157000	Genic enhancers	Primary T helper cells fromperipheralblood	blood
49	chr3:49156400-49157000	Transcr. at gene 5' and 3'	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr3:49156400-49157000	Enhancers	Brain Angular Gyrus	brain

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