Variant report

Variant	rs9840684
Chromosome Location	chr3:48893780-48893781
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:48891600..48893937-chr3:48899694..48902243,2	K562	blood:

Extended variants
information (count: 128 )
Associated
traits (count: 39 )

rSNPs within LD-proxies of this variant (count:126)

rs_ID	r²[population]
rs10780033	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130176	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.97[TSI][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1134591	1.00[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11705737	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11705888	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11706052	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs11706983	1.00[CHD][hapmap]
rs11708022	0.90[ASN][1000 genomes]
rs11708786	1.00[CHD][hapmap]
rs11709246	1.00[ASN][1000 genomes]
rs11712982	0.87[ASN][1000 genomes]
rs11713694	1.00[CHD][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs11717978	0.90[ASN][1000 genomes]
rs11719291	1.00[CHD][hapmap]
rs11719457	0.90[ASN][1000 genomes]
rs11920534	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11924597	1.00[CEU][hapmap];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11928552	0.92[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap]
rs12491743	0.80[EUR][1000 genomes]
rs12493289	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[YRI][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12493578	0.92[CEU][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];0.81[MEX][hapmap];0.83[TSI][hapmap]
rs12497850	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.88[TSI][hapmap]
rs12637037	0.86[EUR][1000 genomes]
rs13064883	0.93[EUR][1000 genomes]
rs13064911	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13072911	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13073997	0.95[ASN][1000 genomes]
rs13076394	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13078308	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs13086240	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs13087930	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs13090839	0.87[ASN][1000 genomes]
rs13092715	0.90[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap]
rs13094900	0.92[ASN][1000 genomes]
rs13315711	1.00[CEU][hapmap];1.00[JPT][hapmap];0.86[YRI][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13316620	0.96[CEU][hapmap];0.87[EUR][1000 genomes]
rs13434258	1.00[CHD][hapmap]
rs1352420	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.88[TSI][hapmap]
rs28642807	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs34037363	1.00[CHD][hapmap];1.00[JPT][hapmap]
rs34477108	0.90[ASN][1000 genomes]
rs34504524	0.82[ASN][1000 genomes]
rs34509487	0.90[ASN][1000 genomes]
rs35064573	1.00[CHD][hapmap]
rs3774628	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4072859	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4858798	0.92[CEU][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs4858828	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs4858831	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs4974078	0.87[CHD][hapmap];0.88[ASN][1000 genomes]
rs4974079	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4974080	0.88[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.91[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4974082	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4974084	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4974085	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4974087	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4974091	0.87[EUR][1000 genomes]
rs55674449	0.83[ASN][1000 genomes]
rs56318350	0.90[ASN][1000 genomes]
rs6414613	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6442130	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6446196	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[GIH][hapmap];0.98[LWK][hapmap];0.88[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];0.93[YRI][hapmap];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6446198	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6446205	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6446252	1.00[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6446253	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs67060340	0.95[ASN][1000 genomes]
rs67332931	1.00[ASN][1000 genomes]
rs6768433	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6772452	0.82[LWK][hapmap];0.86[YRI][hapmap]
rs6781790	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6786665	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6788650	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.88[TSI][hapmap]
rs6789285	0.88[EUR][1000 genomes]
rs6791234	0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6791542	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap];0.84[EUR][1000 genomes]
rs6795025	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6796790	0.93[YRI][hapmap]
rs6801211	0.92[YRI][hapmap]
rs71324924	1.00[ASN][1000 genomes]
rs7372149	0.86[EUR][1000 genomes]
rs7373072	0.88[YRI][hapmap]
rs7373778	0.81[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7373790	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7430198	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7430501	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7431710	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7431857	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7432989	0.82[EUR][1000 genomes]
rs7612459	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7615235	0.83[EUR][1000 genomes]
rs7615675	0.90[EUR][1000 genomes]
rs7616815	1.00[CEU][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes]
rs7621015	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.90[EUR][1000 genomes]
rs7623023	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7626445	0.83[EUR][1000 genomes]
rs7627404	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7628719	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7630742	0.83[EUR][1000 genomes]
rs7636057	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7639332	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7643368	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7647093	0.88[EUR][1000 genomes]
rs7647813	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.86[YRI][hapmap]
rs7649458	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.86[YRI][hapmap];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7653459	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs8926	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9284885	0.81[ASW][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes]
rs9311430	0.96[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];0.94[MEX][hapmap];0.81[MKK][hapmap];0.97[TSI][hapmap];0.89[YRI][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9311432	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9311433	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.89[YRI][hapmap];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9311434	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];1.00[TSI][hapmap];0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9637481	1.00[CEU][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap]
rs9681717	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9682444	1.00[ASW][hapmap];1.00[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9754878	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9755490	1.00[ASW][hapmap];1.00[CEU][hapmap];0.87[CHD][hapmap];0.90[GIH][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9830636	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9835307	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9846123	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[YRI][hapmap];0.86[EUR][1000 genomes]
rs9850134	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[LWK][hapmap];1.00[MEX][hapmap];0.81[MKK][hapmap];1.00[TSI][hapmap];0.86[YRI][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9867373	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9876848	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9879971	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9882549	1.00[CHD][hapmap]
rs9884022	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3487342	chr3:48823957-48960475	Weak transcription Active TSS Strong transcription Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
2	esv3487343	chr3:48823963-48960381	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases

mRNA abundance (count:39)

SNP	Gene	Cis/trans	Tissue	Source
rs9840684	NCKIPSD	cis	Nerve Tibial	GTEx
rs9840684	ARIH2	cis	Thyroid	GTEx
rs9840684	NCKIPSD	cis	cerebellum	SCAN
rs9840684	WDR6	cis	Skin Sun Exposed Lower leg	GTEx
rs9840684	WDR6	cis	lymphoblastoid	seeQTL
rs9840684	P4HTM	cis	parietal	SCAN
rs9840684	NCKIPSD	cis	Muscle Skeletal	GTEx
rs9840684	WDR6	cis	cerebellum	SCAN
rs9840684	WDR6	cis	Adipose Subcutaneous	GTEx
rs9840684	AMT	cis	parietal	SCAN
rs9840684	WDR6	cis	Heart Left Ventricle	GTEx
rs9840684	PHF7	cis	parietal	SCAN
rs9840684	WDR6	cis	Esophagus Mucosa	GTEx
rs9840684	WDR6	cis	Muscle Skeletal	GTEx
rs9840684	NCKIPSD	cis	Whole Blood	GTEx
rs9840684	AMT	cis	Muscle Skeletal	GTEx
rs9840684	WDR6	cis	uninvolved skin	skin_eQTL
rs9840684	AMT	cis	cerebellum	SCAN
rs9840684	CCDC36	cis	Esophagus Muscularis	GTEx
rs9840684	PH-4	Cis_1M	lymphoblastoid	RTeQTL
rs9840684	ARIH2	Cis_1M	lymphoblastoid	RTeQTL
rs9840684	DALRD3	cis	parietal	SCAN
rs9840684	AMT	cis	Whole Blood	GTEx
rs9840684	P4HTM	cis	cerebellum	SCAN
rs9840684	NCKIPSD	cis	parietal	SCAN
rs9840684	NICN1-AS1	cis	Thyroid	GTEx
rs9840684	WDR6	cis	parietal	SCAN
rs9840684	WDR6	cis	Whole Blood	GTEx
rs9840684	AMT	cis	Thyroid	GTEx
rs9840684	WDR6	cis	lung	GTEx
rs9840684	NCKIPSD	cis	Esophagus Muscularis	GTEx
rs9840684	WDR6	cis	Artery Tibial	GTEx
rs9840684	WDR6	cis	Esophagus Muscularis	GTEx
rs9840684	WDR6	cis	Nerve Tibial	GTEx
rs9840684	DALRD3	cis	cerebellum	SCAN
rs9840684	CCDC71	cis	cerebellum	SCAN
rs9840684	CCDC36	cis	Artery Tibial	GTEx
rs9840684	TLR9	cis	parietal	SCAN
rs9840684	NICN1	cis	Thyroid	GTEx

Chromatin state (count:105 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:48885600-48915000	Weak transcription	Small Intestine	intestine
2	chr3:48885800-48894000	Weak transcription	Aorta	Aorta
3	chr3:48885800-48894000	Weak transcription	Gastric	stomach
4	chr3:48885800-48894000	Weak transcription	Psoas Muscle	Psoas
5	chr3:48885800-48896400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr3:48885800-48896400	Weak transcription	Ovary	ovary
7	chr3:48885800-48899600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr3:48885800-48900600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr3:48885800-48906600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr3:48885800-48913600	Weak transcription	Fetal Lung	lung
11	chr3:48886000-48893800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
12	chr3:48886000-48893800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
13	chr3:48886000-48893800	Weak transcription	Colonic Mucosa	Colon
14	chr3:48886000-48895600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr3:48886000-48895600	Weak transcription	Placenta	Placenta
16	chr3:48886000-48895800	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr3:48886000-48896000	Weak transcription	Stomach Mucosa	stomach
18	chr3:48886000-48897800	Weak transcription	HUES48 Cell Line	embryonic stem cell
19	chr3:48886000-48899000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
20	chr3:48886000-48899600	Weak transcription	NHEK	skin
21	chr3:48886000-48899800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr3:48886200-48893800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr3:48886200-48893800	Weak transcription	Primary T helper cells fromperipheralblood	blood
24	chr3:48886200-48893800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr3:48886200-48894600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr3:48886200-48894600	Weak transcription	Primary B cells from cord blood	blood
27	chr3:48886200-48894600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr3:48886200-48895600	Weak transcription	Esophagus	oesophagus
29	chr3:48886200-48895800	Weak transcription	Rectal Smooth Muscle	rectum
30	chr3:48886200-48895800	Weak transcription	HSMMtube	muscle
31	chr3:48886200-48896000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
32	chr3:48886200-48900000	Weak transcription	Pancreatic Islets	Pancreatic Islet
33	chr3:48886200-48900400	Weak transcription	NHLF	lung
34	chr3:48886200-48900800	Weak transcription	NHDF-Ad	bronchial
35	chr3:48886400-48893800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
36	chr3:48886400-48894000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr3:48886400-48894000	Weak transcription	Fetal Brain Female	brain
38	chr3:48886400-48894200	Weak transcription	Primary B cells from peripheral blood	blood
39	chr3:48886400-48894400	Weak transcription	Primary hematopoietic stem cells	blood
40	chr3:48886400-48894800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr3:48886400-48895800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr3:48886400-48896000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
43	chr3:48886400-48896400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr3:48886400-48897800	Weak transcription	Osteobl	bone
45	chr3:48886400-48899800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
46	chr3:48886600-48896200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
47	chr3:48886600-48896400	Weak transcription	Fetal Muscle Trunk	muscle
48	chr3:48886600-48901800	Weak transcription	Fetal Heart	heart
49	chr3:48889200-48902000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
50	chr3:48889400-48893800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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