The 2.0 version of rSNPBase

Variant report

Variant rs11709246
Chromosome Location chr3:48859498-48859499
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:48810000-48882800 Weak transcription Fetal Brain Female brain
2 chr3:48820400-48868200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:48820600-48882800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr3:48826400-48868400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr3:48826800-48869600 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr3:48826800-48882800 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr3:48827800-48865600 Weak transcription Fetal Muscle Leg muscle
8 chr3:48833800-48863600 Weak transcription HSMM muscle
9 chr3:48842200-48871200 Weak transcription Fetal Stomach stomach
10 chr3:48842800-48860600 Weak transcription Fetal Intestine Small intestine
11 chr3:48850400-48870600 Weak transcription Primary B cells from cord blood blood
12 chr3:48850600-48882600 Weak transcription Primary T cells from cord blood blood
13 chr3:48850800-48863200 Weak transcription Primary B cells from peripheral blood blood
14 chr3:48850800-48871600 Weak transcription Monocytes-CD14+_RO01746 blood
15 chr3:48850800-48882600 Weak transcription Primary monocytes fromperipheralblood blood
16 chr3:48850800-48882600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:48851000-48882400 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr3:48851800-48864200 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr3:48851800-48874400 Weak transcription Primary T cells fromperipheralblood blood
20 chr3:48855800-48863800 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr3:48855800-48884000 Weak transcription Primary hematopoietic stem cells blood
22 chr3:48856800-48861000 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr3:48857200-48859800 Enhancers Psoas Muscle Psoas
24 chr3:48857400-48874600 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr3:48857400-48882600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr3:48857600-48882600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr3:48858000-48882600 Weak transcription Brain Germinal Matrix brain
28 chr3:48858200-48864400 Weak transcription Small Intestine intestine
29 chr3:48858600-48859800 Enhancers Fetal Heart heart
30 chr3:48858600-48860400 Weak transcription HepG2 liver
31 chr3:48858600-48863400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr3:48858600-48863600 Weak transcription Muscle Satellite Cultured Cells --
33 chr3:48858600-48863600 Weak transcription HSMMtube muscle
34 chr3:48858600-48863600 Weak transcription NH-A brain
35 chr3:48858600-48863800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr3:48858600-48863800 Weak transcription Adipose Nuclei Adipose
37 chr3:48858600-48864000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr3:48858600-48882400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr3:48858600-48882800 Weak transcription Brain Cingulate Gyrus brain
40 chr3:48858800-48860000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr3:48858800-48862800 Weak transcription NHDF-Ad bronchial
42 chr3:48858800-48863200 Weak transcription Osteobl bone
43 chr3:48858800-48863400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr3:48858800-48863400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr3:48858800-48863600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr3:48858800-48863600 Weak transcription Ovary ovary
47 chr3:48858800-48863800 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr3:48858800-48863800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr3:48858800-48863800 Weak transcription Aorta Aorta
50 chr3:48858800-48863800 Weak transcription Brain Inferior Temporal Lobe brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015