Variant report
| Variant | rs13073997 |
|---|---|
| Chromosome Location | chr3:48911647-48911648 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:48885600-48915000 | Weak transcription | Small Intestine | intestine |
| 2 | chr3:48885800-48913600 | Weak transcription | Fetal Lung | lung |
| 3 | chr3:48889600-48935400 | Weak transcription | Brain Germinal Matrix | brain |
| 4 | chr3:48889800-48916800 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 5 | chr3:48894400-48923000 | Strong transcription | Fetal Intestine Small | intestine |
| 6 | chr3:48894600-48918800 | Weak transcription | HepG2 | liver |
| 7 | chr3:48896400-48934400 | Weak transcription | Brain Hippocampus Middle | brain |
| 8 | chr3:48896600-48918600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 9 | chr3:48896800-48934200 | Weak transcription | Stomach Mucosa | stomach |
| 10 | chr3:48896800-48935000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 11 | chr3:48897000-48911800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 12 | chr3:48897000-48916600 | Weak transcription | GM12878-XiMat | blood |
| 13 | chr3:48897000-48918400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 14 | chr3:48897000-48918800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 15 | chr3:48897000-48921400 | Weak transcription | Primary B cells from cord blood | blood |
| 16 | chr3:48897000-48928600 | Weak transcription | Colon Smooth Muscle | Colon |
| 17 | chr3:48897000-48933600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 18 | chr3:48897000-48934200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 19 | chr3:48897000-48934200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 20 | chr3:48897200-48916600 | Weak transcription | Aorta | Aorta |
| 21 | chr3:48897200-48918400 | Weak transcription | Gastric | stomach |
| 22 | chr3:48897200-48918800 | Weak transcription | Ovary | ovary |
| 23 | chr3:48897200-48918800 | Weak transcription | Psoas Muscle | Psoas |
| 24 | chr3:48897200-48923200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 25 | chr3:48897200-48924400 | Weak transcription | HSMMtube | muscle |
| 26 | chr3:48897200-48934200 | Weak transcription | Colonic Mucosa | Colon |
| 27 | chr3:48897200-48935000 | Weak transcription | NH-A | brain |
| 28 | chr3:48897200-48935200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 29 | chr3:48897400-48918800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 30 | chr3:48897400-48921400 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 31 | chr3:48897400-48934600 | Weak transcription | Brain Anterior Caudate | brain |
| 32 | chr3:48898600-48916800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 33 | chr3:48900000-48915200 | Weak transcription | Fetal Stomach | stomach |
| 34 | chr3:48900000-48916600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 35 | chr3:48900000-48918200 | Weak transcription | Right Ventricle | heart |
| 36 | chr3:48900000-48922400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 37 | chr3:48900200-48913000 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
| 38 | chr3:48900200-48913000 | Weak transcription | Spleen | Spleen |
| 39 | chr3:48900200-48914200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 40 | chr3:48900200-48915000 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 41 | chr3:48900200-48916600 | Weak transcription | Fetal Intestine Large | intestine |
| 42 | chr3:48900200-48916800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 43 | chr3:48900200-48918400 | Weak transcription | Brain Substantia Nigra | brain |
| 44 | chr3:48900200-48919000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 45 | chr3:48900200-48919000 | Weak transcription | Fetal Muscle Leg | muscle |
| 46 | chr3:48900200-48924200 | Weak transcription | Placenta | Placenta |
| 47 | chr3:48900200-48932000 | Weak transcription | Dnd41 | blood |
| 48 | chr3:48900200-48932800 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 49 | chr3:48900200-48935000 | Weak transcription | Esophagus | oesophagus |
| 50 | chr3:48900400-48913000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
