Variant report

Variant	rs4858831
Chromosome Location	chr3:48735558-48735559
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr3:48735520-48735670	BJ	skin:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
2	CTCF	chr3:48735420-48735570	MCF-7	breast:	n/a	n/a
3	CTCF	chr3:48735503-48735627	K562	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
4	CTCF	chr3:48735460-48735730	RPTEC	kidney:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
5	CTCF	chr3:48735480-48735630	HCFaa	heart:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
6	CTCF	chr3:48735460-48735610	A549	lung:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
7	CTCF	chr3:48735554-48735582	Gliobla	brain:	n/a	chr3:48735568-48735581
8	POLR2A	chr3:48735279-48735902	PANC-1	pancreas:	n/a	n/a
9	CTCF	chr3:48735500-48735650	HCPEpiC	choroid plexus:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
10	CTCF	chr3:48735512-48735625	GM12878	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
11	CTCF	chr3:48735480-48735630	HCPEpiC	choroid plexus:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
12	CTCF	chr3:48735479-48735656	Hela-S3	cervix:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
13	CTCF	chr3:48735466-48735614	HepG2	liver:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
14	CTCF	chr3:48735440-48735590	K562	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
15	CTCF	chr3:48735520-48735670	HBMEC	blood vessel:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
16	CTCF	chr3:48735540-48735690	AoAF	blood vessel:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
17	CTCF	chr3:48735520-48735670	Hela-S3	cervix:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
18	CTCF	chr3:48735480-48735630	BJ	skin:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
19	CTCF	chr3:48735396-48735779	MCF-7	breast:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
20	CTCF	chr3:48735540-48735690	NHDF-neo	bronchial:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
21	POLR2A	chr3:48735496-48735704	Hela-S3	cervix:	n/a	n/a
22	RAD21	chr3:48735412-48735758	HepG2	liver:	n/a	chr3:48735566-48735585
23	CTCF	chr3:48735440-48735590	MCF-7	breast:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
24	CTCF	chr3:48735440-48735590	GM12874	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
25	CTCF	chr3:48735500-48735650	HMEC	breast:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
26	CTCF	chr3:48735480-48735630	Caco-2	colon:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
27	RAD21	chr3:48735450-48735685	HepG2	liver:	n/a	chr3:48735566-48735585
28	CTCF	chr3:48735500-48735650	GM12864	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
29	CTCF	chr3:48735480-48735630	AG04449	skin:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
30	CTCF	chr3:48735500-48735650	HPF	lung:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
31	POLR2A	chr3:48735394-48735905	A549	lung:	n/a	n/a
32	FOXA1	chr3:48735370-48735705	HepG2	liver:	n/a	n/a
33	POLR2A	chr3:48735547-48735835	GM12892	blood:	n/a	n/a
34	CTCF	chr3:48735500-48735650	GM06990	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
35	CTCF	chr3:48735460-48735610	HPAF	blood vessel:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
36	CTCF	chr3:48735460-48735610	HEEpiC	esophagus:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
37	CTCF	chr3:48735481-48735643	MCF-7	breast:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
38	CTCF	chr3:48735462-48735645	HepG2	liver:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
39	RAD21	chr3:48735441-48735723	Hela-S3	cervix:	n/a	chr3:48735566-48735585
40	POLR2A	chr3:48735304-48736033	GM12891	blood:	n/a	n/a
41	CTCF	chr3:48735460-48735610	HPF	lung:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
42	CTCF	chr3:48735520-48735670	BE2_C	brain:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
43	CTCF	chr3:48735480-48735630	HRE	kidney:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
44	POLR2A	chr3:48734963-48735966	GM12878	blood:	n/a	n/a
45	FOXA2	chr3:48735427-48735625	HepG2	liver:	n/a	n/a
46	CTCF	chr3:48735508-48735575	Kidney_OC	kidney:	n/a	n/a
47	CTCF	chr3:48735500-48735650	HMF	breast:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
48	CTCF	chr3:48735502-48735625	GM12878	blood:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
49	CTCF	chr3:48735480-48735630	AG09309	skin:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581
50	CTCF	chr3:48735494-48735623	HUVEC	blood vessel:	n/a	chr3:48735567-48735588 chr3:48735565-48735583 chr3:48735568-48735581

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:48725665..48728051-chr3:48734995..48736912,2	MCF-7	breast:
2	chr3:48735352..48738114-chr3:48738712..48740970,2	K562	blood:

Variant related genes	Relation type
IP6K2	TF binding region

Extended variants
information (count: 77 )
Associated
traits (count: 35 )

rSNPs within LD-proxies of this variant (count:75)

rs_ID	r²[population]
rs10780033	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs10865952	0.82[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130176	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap]
rs11557629	1.00[ASN][1000 genomes]
rs11705888	0.81[EUR][1000 genomes]
rs11706203	0.95[ASN][1000 genomes]
rs11706983	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11708786	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11713694	1.00[CHD][hapmap]
rs11715177	0.95[ASN][1000 genomes]
rs11719291	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11928552	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap]
rs12107252	0.80[LWK][hapmap];0.82[YRI][hapmap]
rs12493289	0.92[CEU][hapmap];1.00[JPT][hapmap]
rs12493578	0.82[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.88[MEX][hapmap];1.00[TSI][hapmap];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12497850	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13063223	0.95[ASN][1000 genomes]
rs13090013	0.95[ASN][1000 genomes]
rs13316551	0.95[ASN][1000 genomes]
rs13324950	0.95[ASN][1000 genomes]
rs13434258	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1352420	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.84[MKK][hapmap];0.95[TSI][hapmap];0.83[YRI][hapmap];0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17080319	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs28567949	0.95[ASN][1000 genomes]
rs28657585	0.95[ASN][1000 genomes]
rs28793701	0.95[ASN][1000 genomes]
rs34037363	1.00[CHD][hapmap]
rs34153629	0.95[ASN][1000 genomes]
rs34577723	0.87[ASN][1000 genomes]
rs35064573	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs3774628	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap];0.81[EUR][1000 genomes]
rs3806694	1.00[JPT][hapmap]
rs4077495	0.95[ASN][1000 genomes]
rs4858798	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4858828	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4974079	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs4974085	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs4974087	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.81[TSI][hapmap]
rs61137521	0.81[ASN][1000 genomes]
rs6442130	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap];0.84[EUR][1000 genomes]
rs6446252	0.92[CEU][hapmap]
rs6446253	0.92[CEU][hapmap]
rs6788650	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6791542	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap];0.82[EUR][1000 genomes]
rs6792510	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7428949	1.00[JPT][hapmap]
rs7430501	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs7431857	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs7616815	0.92[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.86[TSI][hapmap];0.84[EUR][1000 genomes]
rs7623023	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap]
rs7627404	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap]
rs7630742	0.81[EUR][1000 genomes]
rs7633840	0.91[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7647813	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.93[MEX][hapmap];0.86[TSI][hapmap]
rs7649458	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap]
rs9311430	0.88[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.88[MEX][hapmap];0.86[TSI][hapmap]
rs9311432	0.90[CEU][hapmap]
rs9311433	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap]
rs9311434	0.92[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap]
rs9682444	0.92[CEU][hapmap];0.87[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap]
rs9755490	0.92[CEU][hapmap];0.87[CHD][hapmap];0.90[GIH][hapmap];0.94[MEX][hapmap];0.83[TSI][hapmap]
rs9811027	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs9811318	0.83[YRI][hapmap]
rs9812200	0.90[YRI][hapmap]
rs9834996	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs9835307	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap]
rs9836462	1.00[YRI][hapmap]
rs9841602	1.00[YRI][hapmap]
rs9848203	0.87[ASN][1000 genomes]
rs9854034	0.92[ASN][1000 genomes]
rs9873726	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9876848	0.92[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.94[MEX][hapmap];0.86[TSI][hapmap]
rs9877542	0.95[ASN][1000 genomes]
rs9877685	0.95[ASN][1000 genomes]
rs9882549	1.00[CHD][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834685	chr3:48565009-48745774	Strong transcription Active TSS Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv590247	chr3:48661985-48801929	Transcr. at gene 5' and 3' Strong transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	53 gene(s)	inside rSNPs	diseases

mRNA abundance (count:35)

SNP	Gene	Cis/trans	Tissue	Source
rs4858831	WDR6	cis	lung	GTEx
rs4858831	ZNF589	cis	cerebellum	SCAN
rs4858831	NICN1	cis	Thyroid	GTEx
rs4858831	NCKIPSD	cis	cerebellum	SCAN
rs4858831	NCKIPSD	cis	Whole Blood	GTEx
rs4858831	NCKIPSD	cis	parietal	SCAN
rs4858831	NCKIPSD	cis	Muscle Skeletal	GTEx
rs4858831	WDR6	cis	Artery Tibial	GTEx
rs4858831	WDR6	cis	multi-tissue	Pritchard
rs4858831	AMT	cis	Thyroid	GTEx
rs4858831	WDR6	cis	lymphoblastoid	seeQTL
rs4858831	DALRD3	cis	parietal	SCAN
rs4858831	NICN1	cis	multi-tissue	Pritchard
rs4858831	WDR6	cis	Adipose Subcutaneous	GTEx
rs4858831	AMT	cis	cerebellum	SCAN
rs4858831	DALRD3	cis	cerebellum	SCAN
rs4858831	ZNF589	cis	parietal	SCAN
rs4858831	WDR6	cis	Muscle Skeletal	GTEx
rs4858831	CCDC36	cis	Artery Tibial	GTEx
rs4858831	C3orf62	cis	cerebellum	SCAN
rs4858831	AMT	cis	multi-tissue	Pritchard
rs4858831	WDR6	cis	parietal	SCAN
rs4858831	TLR9	cis	parietal	SCAN
rs4858831	NICN1-AS1	cis	Thyroid	GTEx
rs4858831	AMT	cis	parietal	SCAN
rs4858831	NCKIPSD	cis	multi-tissue	Pritchard
rs4858831	WDR6	cis	Esophagus Mucosa	GTEx
rs4858831	WDR6	cis	uninvolved skin	skin_eQTL
rs4858831	WDR6	cis	Skin Sun Exposed Lower leg	GTEx
rs4858831	NCKIPSD	cis	Nerve Tibial	GTEx
rs4858831	WDR6	cis	Nerve Tibial	GTEx
rs4858831	WDR6	cis	cerebellum	SCAN
rs4858831	NCKIPSD	cis	Esophagus Muscularis	GTEx
rs4858831	P4HTM	cis	parietal	SCAN
rs4858831	WDR6	cis	Whole Blood	GTEx

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:48724400-48735800	Strong transcription	GM12878-XiMat	blood
2	chr3:48724600-48738000	Strong transcription	Thymus	Thymus
3	chr3:48724600-48738400	Strong transcription	Primary hematopoietic stem cells	blood
4	chr3:48724600-48740400	Strong transcription	Primary B cells from cord blood	blood
5	chr3:48724600-48746600	Strong transcription	Fetal Thymus	thymus
6	chr3:48724600-48749000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr3:48724800-48735800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
8	chr3:48724800-48737600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
9	chr3:48724800-48738400	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr3:48725000-48738600	Strong transcription	Primary monocytes fromperipheralblood	blood
11	chr3:48725000-48738600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
12	chr3:48725000-48740400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr3:48725000-48740800	Strong transcription	Dnd41	blood
14	chr3:48725200-48738600	Strong transcription	Primary B cells from peripheral blood	blood
15	chr3:48725200-48746200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr3:48732400-48736400	Genic enhancers	Primary T cells fromperipheralblood	blood
17	chr3:48732800-48744800	Weak transcription	Small Intestine	intestine
18	chr3:48732800-48745400	Weak transcription	Psoas Muscle	Psoas
19	chr3:48733000-48735600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
20	chr3:48733000-48736200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr3:48733000-48736400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
22	chr3:48733000-48740200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
23	chr3:48733000-48744800	Weak transcription	Colon Smooth Muscle	Colon
24	chr3:48733000-48745400	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr3:48733000-48753400	Weak transcription	Aorta	Aorta
26	chr3:48733200-48735600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr3:48733200-48736000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr3:48733200-48736200	Weak transcription	Adipose Nuclei	Adipose
29	chr3:48733200-48736200	Weak transcription	Spleen	Spleen
30	chr3:48733200-48736800	Weak transcription	Colonic Mucosa	Colon
31	chr3:48733200-48737600	Strong transcription	Rectal Mucosa Donor 31	rectum
32	chr3:48733200-48738600	Strong transcription	Fetal Lung	lung
33	chr3:48733200-48738800	Strong transcription	Fetal Muscle Leg	muscle
34	chr3:48733200-48740800	Strong transcription	Fetal Muscle Trunk	muscle
35	chr3:48733200-48744000	Weak transcription	Esophagus	oesophagus
36	chr3:48733200-48746000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr3:48733200-48746000	Strong transcription	Fetal Intestine Small	intestine
38	chr3:48733200-48746200	Weak transcription	Right Ventricle	heart
39	chr3:48733600-48735800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr3:48733600-48735800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr3:48733600-48739200	Strong transcription	Sigmoid Colon	Sigmoid Colon
42	chr3:48734000-48735600	Weak transcription	Primary neutrophils fromperipheralblood	blood
43	chr3:48734000-48735800	Weak transcription	Stomach Smooth Muscle	stomach
44	chr3:48734000-48737400	Strong transcription	HSMMtube	muscle
45	chr3:48734000-48737600	Strong transcription	NH-A	brain
46	chr3:48734000-48737800	Strong transcription	HSMM	muscle
47	chr3:48734000-48738000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
48	chr3:48734000-48738600	Strong transcription	Rectal Mucosa Donor 29	rectum
49	chr3:48734000-48746400	Weak transcription	Fetal Brain Male	brain
50	chr3:48734200-48735600	Weak transcription	HUES6 Cell Line	embryonic stem cell

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