Variant report

Variant	rs13123859
Chromosome Location	chr4:62116266-62116267
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10018853	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11723103	0.91[ASN][1000 genomes]
rs11731649	0.91[ASN][1000 genomes]
rs13127903	0.91[ASN][1000 genomes]
rs13140257	0.89[ASN][1000 genomes]
rs1505664	0.89[ASN][1000 genomes]
rs1505682	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1551049	0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2342455	0.89[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs2342486	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28634991	0.87[ASN][1000 genomes]
rs972616	0.94[ASN][1000 genomes]
rs974538	0.85[AFR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62111400-62120000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr4:62111400-62129400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr4:62112000-62116800	Weak transcription	Fetal Muscle Leg	muscle
4	chr4:62112000-62120800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr4:62112200-62118400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr4:62112200-62124000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr4:62112800-62119200	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr4:62115200-62118600	Weak transcription	Brain Angular Gyrus	brain
9	chr4:62115200-62119000	Weak transcription	Brain Inferior Temporal Lobe	brain
10	chr4:62115400-62118600	Weak transcription	Brain Anterior Caudate	brain
11	chr4:62115600-62116400	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr4:62115800-62118800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
13	chr4:62116000-62119600	Weak transcription	Brain Substantia Nigra	brain
14	chr4:62116000-62127000	Weak transcription	Brain Cingulate Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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