Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10010876	0.81[ASN][1000 genomes]
rs10018853	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs10033220	0.81[ASN][1000 genomes]
rs11723103	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11731649	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12505585	0.81[ASN][1000 genomes]
rs12505990	0.85[ASN][1000 genomes]
rs12508911	0.81[ASN][1000 genomes]
rs12511914	0.81[ASN][1000 genomes]
rs13123859	0.89[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs13127903	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13140257	0.96[ASN][1000 genomes]
rs1505664	0.85[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1505682	0.89[ASN][1000 genomes]
rs1505685	0.81[ASN][1000 genomes]
rs1551049	0.86[ASN][1000 genomes]
rs2342486	0.92[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs28634991	0.93[ASN][1000 genomes]
rs35289145	0.85[ASN][1000 genomes]
rs950867	0.85[ASN][1000 genomes]
rs972616	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs974538	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9998310	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3417367	chr4:62123807-62124176	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:62111400-62129400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:62112200-62124000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
3	chr4:62116000-62127000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr4:62119800-62127400	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr4:62120600-62126000	Weak transcription	Brain Substantia Nigra	brain
6	chr4:62120600-62126600	Weak transcription	Brain Anterior Caudate	brain
7	chr4:62121000-62125400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:62122000-62128200	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr4:62122400-62126200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr4:62123400-62124600	Enhancers	Fetal Heart	heart
11	chr4:62123800-62124200	Enhancers	Fetal Muscle Leg	muscle

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