Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:81627156..81628838-chr4:81631785..81634489,2	K562	blood:

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs1027294	1.00[JPT][hapmap]
rs1027295	1.00[JPT][hapmap]
rs10516649	1.00[JPT][hapmap]
rs10857170	0.85[ASN][1000 genomes]
rs11099248	0.85[ASN][1000 genomes]
rs11099448	1.00[JPT][hapmap]
rs11732671	0.83[ASN][1000 genomes]
rs11732964	0.83[ASN][1000 genomes]
rs12233833	0.90[ASN][1000 genomes]
rs12639952	0.90[ASN][1000 genomes]
rs12639967	0.90[ASN][1000 genomes]
rs12648193	0.83[ASN][1000 genomes]
rs12650756	0.85[ASN][1000 genomes]
rs13111397	0.85[ASN][1000 genomes]
rs13112370	0.85[ASN][1000 genomes]
rs13119650	1.00[JPT][hapmap]
rs13127693	0.82[ASN][1000 genomes]
rs13129485	1.00[JPT][hapmap]
rs13129636	0.85[ASN][1000 genomes]
rs13136894	0.90[ASN][1000 genomes]
rs13140222	0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs13141796	0.90[ASN][1000 genomes]
rs13146627	0.85[ASN][1000 genomes]
rs1486023	0.90[ASN][1000 genomes]
rs1495490	0.85[ASN][1000 genomes]
rs1531959	0.83[ASN][1000 genomes]
rs17004945	0.90[ASN][1000 genomes]
rs28494703	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34620960	1.00[JPT][hapmap]
rs34890603	0.85[ASN][1000 genomes]
rs34938691	0.85[ASN][1000 genomes]
rs35308242	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35466241	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35565546	0.85[ASN][1000 genomes]
rs35990705	0.90[ASN][1000 genomes]
rs6829720	0.83[ASN][1000 genomes]
rs6843444	0.85[ASN][1000 genomes]
rs6856538	0.85[ASN][1000 genomes]
rs71596010	0.85[ASN][1000 genomes]
rs71596022	0.90[ASN][1000 genomes]
rs7678081	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1002776	chr4:81480374-81802614	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv537154	chr4:81480374-81802614	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv3518601	chr4:81523238-81831941	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv3518602	chr4:81523354-81831976	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:81624600-81630600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr4:81625200-81634400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr4:81626800-81634200	Weak transcription	Colon Smooth Muscle	Colon
4	chr4:81627400-81633000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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