Variant report

Variant	rs13169286
Chromosome Location	chr5:116484184-116484185
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10068492	0.85[EUR][1000 genomes]
rs10223221	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs13163160	0.89[ASN][1000 genomes]
rs13166199	0.82[AMR][1000 genomes]
rs13168914	0.89[ASN][1000 genomes]
rs13169066	0.89[ASN][1000 genomes]
rs13361759	0.85[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17392934	0.81[EUR][1000 genomes]
rs28509225	0.89[ASN][1000 genomes]
rs4920964	0.86[EUR][1000 genomes]
rs7711251	0.89[ASN][1000 genomes]
rs7735944	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752839	chr5:116461101-116504101	Enhancers Weak transcription Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:116477000-116488800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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