The 2.0 version of rSNPBase

Variant report

Variant rs13198102
Chromosome Location chr6:144911424-144911425
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:144881800-144937800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr6:144885800-144943400 Weak transcription Ovary ovary
3 chr6:144898600-144912800 Weak transcription Gastric stomach
4 chr6:144899600-144913800 Weak transcription Lung lung
5 chr6:144899600-144931800 Weak transcription Esophagus oesophagus
6 chr6:144899800-144914400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr6:144899800-144914400 Weak transcription Fetal Intestine Small intestine
8 chr6:144899800-144917400 Weak transcription Fetal Muscle Trunk muscle
9 chr6:144900000-144915400 Weak transcription Pancreas Pancrea
10 chr6:144904400-144931600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr6:144904400-144931800 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr6:144904600-144913000 Weak transcription Rectal Smooth Muscle rectum
13 chr6:144904600-144913600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr6:144904600-144913800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr6:144904600-144914400 Weak transcription HSMM muscle
16 chr6:144904600-144915800 Weak transcription Psoas Muscle Psoas
17 chr6:144904600-144915800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr6:144904600-144916400 Weak transcription Fetal Stomach stomach
19 chr6:144904600-144921600 Weak transcription Fetal Muscle Leg muscle
20 chr6:144904600-144923600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr6:144904600-144939800 Weak transcription HSMMtube muscle
22 chr6:144904800-144913400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr6:144904800-144914200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr6:144904800-144914200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr6:144904800-144914200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr6:144904800-144914600 Weak transcription Spleen Spleen
27 chr6:144904800-144915800 Weak transcription NH-A brain
28 chr6:144904800-144921200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr6:144904800-144929000 Weak transcription Left Ventricle heart
30 chr6:144904800-144935400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr6:144905200-144912200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr6:144905400-144923200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
33 chr6:144905400-144923400 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr6:144905800-144913000 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr6:144905800-144915400 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr6:144905800-144922200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr6:144906400-144911600 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr6:144906400-144913600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr6:144906400-144918600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr6:144906400-144922800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr6:144906800-144914800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr6:144907400-144914600 Weak transcription HUES6 Cell Line embryonic stem cell
43 chr6:144907400-144914600 Weak transcription Fetal Lung lung
44 chr6:144907600-144914000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr6:144907600-144914400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr6:144908200-144913600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr6:144908400-144912600 Strong transcription Primary hematopoietic stem cells blood
48 chr6:144908400-144914000 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr6:144908600-144911800 Weak transcription HUES64 Cell Line embryonic stem cell
50 chr6:144908600-144922400 Weak transcription iPS-15b Cell Line embryonic stem cell

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Last update: Aug 31, 2015