Variant report

Variant rs1320445
Chromosome Location chr6:119400060-119400061
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:119397400-119400800 Active TSS Brain Inferior Temporal Lobe brain
2 chr6:119398000-119400600 Active TSS Colon Smooth Muscle Colon
3 chr6:119398000-119400800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
4 chr6:119398000-119401000 Active TSS Breast Myoepithelial Primary Cells Breast
5 chr6:119398200-119400200 Active TSS Placenta Placenta
6 chr6:119398200-119400400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
7 chr6:119398200-119400600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr6:119398200-119400600 Active TSS Rectal Smooth Muscle rectum
9 chr6:119398200-119400800 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
10 chr6:119398200-119400800 Active TSS Rectal Mucosa Donor 29 rectum
11 chr6:119398400-119400400 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr6:119398400-119400600 Active TSS Brain Hippocampus Middle brain
13 chr6:119398400-119400600 Active TSS Duodenum Smooth Muscle Duodenum
14 chr6:119398400-119400600 Active TSS Fetal Intestine Small intestine
15 chr6:119398400-119400800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
16 chr6:119398400-119401000 Active TSS Ovary ovary
17 chr6:119398400-119401200 Active TSS Stomach Smooth Muscle stomach
18 chr6:119398600-119401000 Active TSS Right Atrium heart
19 chr6:119398800-119400200 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
20 chr6:119398800-119400200 Active TSS H9 Cell Line embryonic stem cell
21 chr6:119398800-119400200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr6:119398800-119400200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
23 chr6:119398800-119400400 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr6:119398800-119400800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:119398800-119400800 Active TSS Fetal Kidney kidney
26 chr6:119398800-119401000 Active TSS Pancreatic Islets Pancreatic Islet
27 chr6:119399000-119400200 Active TSS ES-WA7 Cell Line embryonic stem cell
28 chr6:119399000-119400200 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:119399000-119400200 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
30 chr6:119399000-119400200 Active TSS Primary T helper memory cells from peripheral blood 2 blood
31 chr6:119399000-119400200 Active TSS Cortex derived primary cultured neurospheres brain
32 chr6:119399000-119400400 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr6:119399000-119400400 Active TSS Primary T killer memory cells from peripheral blood blood
34 chr6:119399000-119400400 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin03 Skin
35 chr6:119399000-119400600 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
36 chr6:119399000-119400600 Active TSS Brain Cingulate Gyrus brain
37 chr6:119399000-119400600 Active TSS Esophagus oesophagus
38 chr6:119399000-119400600 Active TSS Gastric stomach
39 chr6:119399000-119400600 Active TSS Left Ventricle heart
40 chr6:119399000-119400800 Flanking Active TSS Primary hematopoietic stem cells blood
41 chr6:119399000-119400800 Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr6:119399000-119400800 Active TSS Brain Anterior Caudate brain
43 chr6:119399000-119400800 Bivalent/Poised TSS A549 lung
44 chr6:119399000-119400800 Bivalent/Poised TSS HSMMtube muscle
45 chr6:119399200-119400200 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:119399200-119400200 Active TSS iPS-18 Cell Line embryonic stem cell
47 chr6:119399200-119400200 Active TSS Primary T cells from cord blood blood
48 chr6:119399200-119400200 Active TSS Primary T cells fromperipheralblood blood
49 chr6:119399200-119400200 Active TSS Primary T helper naive cells fromperipheralblood blood
50 chr6:119399200-119400200 Active TSS Primary T helper cells PMA-I stimulated --

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