Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10947058	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11753736	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11758350	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12192345	0.80[EUR][1000 genomes]
rs12194485	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12202131	0.85[EUR][1000 genomes]
rs12212092	1.00[ASN][1000 genomes]
rs1264622	1.00[ASN][1000 genomes]
rs13212414	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13215307	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16897204	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2516722	1.00[ASN][1000 genomes]
rs2844753	1.00[ASN][1000 genomes]
rs34366388	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6920344	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6942037	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs928824	1.00[ASN][1000 genomes]
rs9295837	1.00[ASN][1000 genomes]
rs9501426	1.00[ASN][1000 genomes]
rs9501427	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv884057	chr6:30140540-30149251	ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Enhancers Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30139000-30152000	Weak transcription	Liver	Liver
2	chr6:30141200-30146200	Weak transcription	HepG2	liver

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