Variant report
Variant | rs13219669 |
---|---|
Chromosome Location | chr6:69642099-69642100 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10484792 | 1.00[YRI][hapmap] |
rs10485436 | 0.84[AMR][1000 genomes] |
rs13191240 | 1.00[JPT][hapmap] |
rs13191563 | 1.00[JPT][hapmap] |
rs13197569 | 1.00[JPT][hapmap] |
rs13205016 | 1.00[JPT][hapmap] |
rs13205140 | 1.00[JPT][hapmap] |
rs13219339 | 1.00[JPT][hapmap] |
rs13220538 | 1.00[YRI][hapmap] |
rs16900400 | 1.00[JPT][hapmap] |
rs2200088 | 1.00[JPT][hapmap] |
rs3757045 | 1.00[JPT][hapmap] |
rs3798980 | 1.00[JPT][hapmap];1.00[YRI][hapmap] |
rs3798996 | 1.00[JPT][hapmap] |
rs3799023 | 1.00[JPT][hapmap] |
rs3823061 | 1.00[JPT][hapmap] |
rs6903686 | 1.00[JPT][hapmap] |
rs6908180 | 1.00[JPT][hapmap] |
rs6919909 | 1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6934473 | 1.00[JPT][hapmap] |
rs7761270 | 1.00[JPT][hapmap] |
rs7767118 | 1.00[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv470831 | chr6:69581991-69654650 | Weak transcription Enhancers ZNF genes & repeats Strong transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
2 | nsv886136 | chr6:69598297-69654650 | Weak transcription Strong transcription ZNF genes & repeats Enhancers | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |