Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10089072	0.83[EUR][1000 genomes]
rs10098493	1.00[CHB][hapmap]
rs10101852	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10104822	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10105544	1.00[ASN][1000 genomes]
rs10108246	0.90[EUR][1000 genomes]
rs10113032	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13249313	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13256075	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs13264316	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13268431	1.00[JPT][hapmap]
rs13282515	0.89[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17829826	1.00[JPT][hapmap]
rs28571610	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs34757246	0.81[EUR][1000 genomes]
rs35572206	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4410948	1.00[CHB][hapmap]
rs4541975	1.00[CHB][hapmap]
rs4560832	1.00[CHB][hapmap]
rs4875924	0.80[EUR][1000 genomes]
rs4875927	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4876235	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4876236	0.85[EUR][1000 genomes]
rs6558575	1.00[CHB][hapmap]
rs6558590	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7463722	0.85[EUR][1000 genomes]
rs9650491	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889712	chr8:1591412-2337777	Weak transcription Active TSS Strong transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:1991600-2005400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:1998800-2003000	Enhancers	HSMMtube	muscle
3	chr8:1999000-2005400	Weak transcription	Right Atrium	heart
4	chr8:1999200-2003400	Enhancers	HSMM	muscle
5	chr8:2000800-2003400	Weak transcription	Right Ventricle	heart
6	chr8:2001000-2002600	Enhancers	Fetal Heart	heart
7	chr8:2001000-2003200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr8:2001000-2003400	Weak transcription	Fetal Muscle Trunk	muscle
9	chr8:2001000-2006600	Genic enhancers	Skeletal Muscle Male	skeletal muscle
10	chr8:2001200-2003000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr8:2001600-2002600	Enhancers	Psoas Muscle	Psoas
12	chr8:2001800-2003000	Enhancers	Osteobl	bone
13	chr8:2002000-2002600	Enhancers	Left Ventricle	heart
14	chr8:2002200-2003200	Enhancers	Fetal Muscle Leg	muscle
15	chr8:2002400-2003200	Enhancers	Muscle Satellite Cultured Cells	--
16	chr8:2002400-2010400	Genic enhancers	Skeletal Muscle Female	skeletal muscle

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