Variant report

Variant	rs13275737
Chromosome Location	chr8:66568617-66568618
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:66556334..66559054-chr8:66567036..66568657,2	MCF-7	breast:
2	chr8:66555538..66559182-chr8:66566895..66570032,4	K562	blood:

Variant related genes	Relation type
ENSG00000066855	Chromatin interaction

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10102473	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1022252	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10504388	1.00[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs10808746	0.84[ASN][1000 genomes]
rs11775485	0.95[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11996845	1.00[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12156235	0.90[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs1473600	0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16932226	0.90[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs2048648	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4236943	0.90[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs4737740	0.90[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs6983230	0.91[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7006732	1.00[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7011819	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7833031	0.82[ASN][1000 genomes]
rs9298104	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs953593	0.81[ASN][1000 genomes]
rs9643393	0.81[AFR][1000 genomes];0.96[EUR][1000 genomes]

No data

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:66558000-66568800	Weak transcription	Fetal Intestine Small	intestine
2	chr8:66558000-66569400	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr8:66558000-66569600	Weak transcription	Esophagus	oesophagus
4	chr8:66558000-66571000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:66558000-66571000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr8:66558000-66571000	Weak transcription	Fetal Lung	lung
7	chr8:66558000-66571000	Weak transcription	Fetal Muscle Trunk	muscle
8	chr8:66558000-66571000	Weak transcription	Fetal Muscle Leg	muscle
9	chr8:66558000-66571000	Weak transcription	Sigmoid Colon	Sigmoid Colon
10	chr8:66558000-66571000	Weak transcription	Thymus	Thymus
11	chr8:66558000-66571000	Weak transcription	HSMMtube	muscle
12	chr8:66558000-66571000	Weak transcription	NH-A	brain
13	chr8:66558000-66571200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr8:66558000-66571200	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr8:66558000-66571600	Weak transcription	Lung	lung
16	chr8:66558000-66582400	Weak transcription	Placenta	Placenta
17	chr8:66558000-66583400	Weak transcription	Aorta	Aorta
18	chr8:66558000-66585200	Weak transcription	Left Ventricle	heart
19	chr8:66558200-66569600	Weak transcription	Fetal Stomach	stomach
20	chr8:66558200-66570600	Weak transcription	Fetal Intestine Large	intestine
21	chr8:66558200-66570800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr8:66558200-66570800	Weak transcription	Primary B cells from cord blood	blood
23	chr8:66558200-66570800	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr8:66558200-66571000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr8:66558200-66571000	Weak transcription	HSMM	muscle
26	chr8:66558200-66571200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr8:66558200-66573600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr8:66558400-66568800	Weak transcription	HUES6 Cell Line	embryonic stem cell
29	chr8:66558400-66569400	Weak transcription	Duodenum Mucosa	Duodenum
30	chr8:66558400-66569800	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr8:66558400-66570000	Weak transcription	Osteobl	bone
32	chr8:66558400-66571000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
33	chr8:66558400-66606800	Weak transcription	Rectal Mucosa Donor 29	rectum
34	chr8:66558600-66569000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
35	chr8:66558600-66569800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
36	chr8:66558600-66570000	Weak transcription	Muscle Satellite Cultured Cells	--
37	chr8:66558600-66570800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
38	chr8:66558600-66570800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr8:66558600-66571000	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr8:66558600-66571200	Weak transcription	Brain Hippocampus Middle	brain
41	chr8:66558800-66569400	Weak transcription	HUES64 Cell Line	embryonic stem cell
42	chr8:66558800-66571000	Weak transcription	HMEC	breast
43	chr8:66558800-66571200	Weak transcription	HUVEC	blood vessel
44	chr8:66559000-66571200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr8:66559400-66569200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr8:66559400-66570800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr8:66559400-66570800	Weak transcription	Hela-S3	cervix
48	chr8:66559400-66571000	Weak transcription	Primary T cells from cord blood	blood
49	chr8:66559600-66569400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
50	chr8:66559600-66570000	Weak transcription	Primary T helper cells PMA-I stimulated	--

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