The 2.0 version of rSNPBase

Variant report

Variant rs13294381
Chromosome Location chr9:96349538-96349539
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:96340400-96351200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr9:96340600-96351600 Weak transcription Thymus Thymus
3 chr9:96341200-96351200 Weak transcription NHDF-Ad bronchial
4 chr9:96341400-96350200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr9:96341400-96356000 Weak transcription Hela-S3 cervix
6 chr9:96341600-96351600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr9:96341600-96359600 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr9:96341800-96362200 Weak transcription Monocytes-CD14+_RO01746 blood
9 chr9:96342200-96359600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr9:96342600-96357800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr9:96343400-96360600 Weak transcription Dnd41 blood
12 chr9:96343600-96350000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr9:96344800-96356400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr9:96345000-96349800 Weak transcription Placenta Placenta
15 chr9:96345000-96350000 Weak transcription K562 blood
16 chr9:96345000-96351200 Weak transcription Adipose Nuclei Adipose
17 chr9:96345000-96351400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr9:96345000-96355000 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr9:96345000-96356400 Weak transcription H1 Cell Line embryonic stem cell
20 chr9:96345000-96362600 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr9:96345200-96350400 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr9:96345200-96351200 Weak transcription Fetal Lung lung
23 chr9:96345400-96351200 Weak transcription HSMMtube muscle
24 chr9:96345400-96351400 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr9:96345600-96350000 Weak transcription Stomach Mucosa stomach
26 chr9:96345600-96351600 Weak transcription Fetal Intestine Large intestine
27 chr9:96345600-96351800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr9:96347400-96352200 Enhancers Psoas Muscle Psoas
29 chr9:96347400-96353800 Enhancers Ovary ovary
30 chr9:96347400-96355400 Enhancers Pancreas Pancrea
31 chr9:96347400-96359000 Enhancers Left Ventricle heart
32 chr9:96347600-96351600 Enhancers Skeletal Muscle Female skeletal muscle
33 chr9:96347600-96352800 Enhancers Gastric stomach
34 chr9:96347600-96353000 Enhancers Lung lung
35 chr9:96347600-96353600 Enhancers Primary T cells fromperipheralblood blood
36 chr9:96347600-96355200 Enhancers Right Atrium heart
37 chr9:96347600-96355600 Enhancers Right Ventricle heart
38 chr9:96347600-96356200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr9:96347600-96360600 Weak transcription Primary hematopoietic stem cells blood
40 chr9:96347800-96349800 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr9:96347800-96350000 Enhancers Cortex derived primary cultured neurospheres brain
42 chr9:96347800-96350200 Enhancers Brain Cingulate Gyrus brain
43 chr9:96347800-96351400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr9:96348000-96349600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr9:96348000-96350800 Enhancers Brain Anterior Caudate brain
46 chr9:96348000-96350800 Enhancers Brain Inferior Temporal Lobe brain
47 chr9:96348000-96350800 Weak transcription HepG2 liver
48 chr9:96348000-96351400 Weak transcription Primary T cells from cord blood blood
49 chr9:96348000-96353800 Enhancers Fetal Muscle Trunk muscle
50 chr9:96348200-96349600 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015