Variant report

Variant	rs1367988
Chromosome Location	chr11:83238384-83238385
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10898134	0.84[ASN][1000 genomes]
rs11233663	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1367987	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1432057	0.84[ASN][1000 genomes]
rs1465668	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3793945	0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3793946	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4316529	0.84[ASN][1000 genomes]
rs4494323	0.84[ASN][1000 genomes]
rs6592120	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7113167	0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7924348	0.84[ASN][1000 genomes]
rs7927435	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83233400-83250800	Weak transcription	Hela-S3	cervix
2	chr11:83235000-83239000	Weak transcription	Psoas Muscle	Psoas
3	chr11:83235000-83244200	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83235200-83238400	Weak transcription	Liver	Liver
5	chr11:83235200-83251000	Weak transcription	Brain Anterior Caudate	brain
6	chr11:83235200-83251200	Weak transcription	Brain Cingulate Gyrus	brain
7	chr11:83235200-83251200	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:83235200-83251400	Weak transcription	Brain Angular Gyrus	brain
9	chr11:83235800-83244400	Weak transcription	Brain Substantia Nigra	brain
10	chr11:83238000-83240200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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