Variant report

Variant	rs7927435
Chromosome Location	chr11:83256122-83256123
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:83255700..83257941-chr11:83263394..83265882,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10898134	0.83[ASN][1000 genomes]
rs11233663	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11233667	0.85[ASN][1000 genomes]
rs1367987	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1367988	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1432057	0.90[ASN][1000 genomes]
rs1465668	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3793945	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3793946	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4316529	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4494323	0.90[ASN][1000 genomes]
rs516344	0.85[ASN][1000 genomes]
rs516435	0.85[ASN][1000 genomes]
rs543068	0.85[ASN][1000 genomes]
rs574361	0.85[ASN][1000 genomes]
rs645427	0.85[ASN][1000 genomes]
rs656727	0.85[ASN][1000 genomes]
rs658438	0.85[ASN][1000 genomes]
rs6592120	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs659427	0.85[ASN][1000 genomes]
rs694847	0.85[ASN][1000 genomes]
rs7113167	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7924348	0.89[ASN][1000 genomes]
rs7926588	0.84[ASN][1000 genomes]
rs7928931	0.81[ASN][1000 genomes]
rs7939707	0.85[ASN][1000 genomes]
rs7940037	0.85[ASN][1000 genomes]

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83251000-83257600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr11:83251000-83257600	Enhancers	Brain Anterior Caudate	brain
3	chr11:83251000-83258200	Enhancers	Brain Hippocampus Middle	brain
4	chr11:83251200-83257400	Enhancers	Brain Cingulate Gyrus	brain
5	chr11:83251200-83258200	Enhancers	Brain Inferior Temporal Lobe	brain
6	chr11:83251400-83257600	Enhancers	Brain Angular Gyrus	brain
7	chr11:83251600-83258200	Enhancers	Brain Substantia Nigra	brain
8	chr11:83252600-83256600	Weak transcription	Fetal Lung	lung
9	chr11:83252800-83258200	Enhancers	Fetal Intestine Large	intestine
10	chr11:83253600-83258000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr11:83254000-83256200	Enhancers	Hela-S3	cervix
12	chr11:83254000-83257000	Enhancers	Fetal Muscle Leg	muscle
13	chr11:83254200-83256200	Enhancers	Duodenum Mucosa	Duodenum
14	chr11:83254200-83256600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr11:83254400-83256200	Enhancers	Fetal Intestine Small	intestine
16	chr11:83254400-83257200	Enhancers	Fetal Stomach	stomach
17	chr11:83254600-83256600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr11:83254800-83256200	Enhancers	NHEK	skin
19	chr11:83254800-83256400	Weak transcription	Fetal Brain Female	brain
20	chr11:83254800-83256800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
21	chr11:83255000-83256400	Weak transcription	Brain Germinal Matrix	brain
22	chr11:83255400-83256200	Enhancers	Small Intestine	intestine
23	chr11:83255600-83256800	Weak transcription	Fetal Brain Male	brain
24	chr11:83255600-83261000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr11:83256000-83261400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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