Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10955617	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11783119	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11783519	0.80[EUR][1000 genomes]
rs11784683	0.80[EUR][1000 genomes]
rs11786836	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11989521	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16883301	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs16883320	0.81[EUR][1000 genomes]
rs16883325	0.81[EUR][1000 genomes]
rs1861753	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1861754	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2052344	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2098455	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4143626	0.80[EUR][1000 genomes]
rs55691798	0.81[EUR][1000 genomes]
rs62514386	0.81[EUR][1000 genomes]
rs62514388	0.81[EUR][1000 genomes]
rs62514389	0.80[EUR][1000 genomes]
rs6469409	0.88[EUR][1000 genomes]
rs888254	0.81[EUR][1000 genomes]
rs950983	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs990616	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533857	chr8:112819659-113801258	Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
2	nsv891322	chr8:112978128-113267916	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1022457	chr8:113071774-113811177	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:113229600-113231000	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr8:113229600-113231000	Enhancers	A549	lung
3	chr8:113229800-113230200	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr8:113229800-113231200	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr8:113230000-113230200	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr8:113230000-113230600	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr8:113230000-113230800	Enhancers	HepG2	liver
8	chr8:113230000-113231000	Active TSS	ES-I3 Cell Line	embryonic stem cell
9	chr8:113230000-113231200	Enhancers	H1 Cell Line	embryonic stem cell
10	chr8:113230000-113231200	Enhancers	H9 Cell Line	embryonic stem cell

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