Variant report

Variant	rs1425747
Chromosome Location	chr1:165476658-165476659
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165476266..165479169-chr14:54928922..54931145,2	MCF-7	breast:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1913839	0.94[AMR][1000 genomes]
rs206235	0.97[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2104513	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2459239	0.97[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2478259	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2478265	0.94[AMR][1000 genomes]
rs2485402	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2485406	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2553640	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2766085	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs285455	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs285457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs285458	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs285472	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs285498	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35865999	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3856210	1.00[CEU][hapmap];0.94[AMR][1000 genomes]
rs398071	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs407380	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs417326	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs417973	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs425833	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165466800-165479600	Weak transcription	Fetal Heart	heart
2	chr1:165467600-165483200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:165472200-165476800	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr1:165472200-165477400	Weak transcription	Skeletal Muscle Male	skeletal muscle

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