Variant report

Variant	rs2478259
Chromosome Location	chr1:165494223-165494224
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1425747	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1913839	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs206235	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs206236	0.87[CEU][hapmap]
rs2104513	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2459239	0.97[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2478265	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2485402	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs2485406	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2553640	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs2766085	1.00[ASW][hapmap];0.93[TSI][hapmap];1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs285455	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs285457	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285458	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs285472	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs285498	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs35865999	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs3856210	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs398071	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs407380	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs417326	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs417973	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs425833	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165493200-165496600	Enhancers	HepG2	liver
2	chr1:165493400-165495200	Enhancers	Brain Hippocampus Middle	brain
3	chr1:165493800-165494600	Enhancers	Brain Cingulate Gyrus	brain
4	chr1:165493800-165495000	Enhancers	Brain Substantia Nigra	brain
5	chr1:165494000-165494400	Enhancers	Brain Angular Gyrus	brain
6	chr1:165494000-165495200	Enhancers	Fetal Muscle Leg	muscle
7	chr1:165494000-165495400	Enhancers	Brain Inferior Temporal Lobe	brain
8	chr1:165494200-165494800	Enhancers	Fetal Heart	heart

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