The 2.0 version of rSNPBase

Variant report

Variant rs1434576
Chromosome Location chr19:44848815-44848816
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44823200-44856200 ZNF genes & repeats Liver Liver
2 chr19:44828600-44851000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
3 chr19:44830800-44850400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr19:44837400-44851000 ZNF genes & repeats Ovary ovary
5 chr19:44840800-44860000 Weak transcription NHDF-Ad bronchial
6 chr19:44842800-44850200 Weak transcription Fetal Heart heart
7 chr19:44844200-44859600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr19:44844200-44859800 Weak transcription Osteobl bone
9 chr19:44844800-44851000 Weak transcription Muscle Satellite Cultured Cells --
10 chr19:44844800-44853000 Weak transcription HSMMtube muscle
11 chr19:44845000-44850200 Weak transcription NH-A brain
12 chr19:44845000-44860000 Weak transcription Placenta Amnion Placenta Amnion
13 chr19:44845200-44849000 Weak transcription Brain Hippocampus Middle brain
14 chr19:44845200-44860000 Weak transcription HSMM muscle
15 chr19:44845400-44859800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr19:44846200-44849400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr19:44846600-44849200 Weak transcription Brain Germinal Matrix brain
18 chr19:44846600-44849200 ZNF genes & repeats Fetal Intestine Small intestine
19 chr19:44847000-44853200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr19:44847200-44849000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
21 chr19:44847200-44850600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
22 chr19:44847400-44849000 Strong transcription Brain Angular Gyrus brain
23 chr19:44847400-44849000 ZNF genes & repeats Duodenum Mucosa Duodenum
24 chr19:44847400-44849600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr19:44847400-44849600 ZNF genes & repeats Adipose Nuclei Adipose
26 chr19:44847400-44849800 Strong transcription Stomach Smooth Muscle stomach
27 chr19:44847400-44850000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr19:44847400-44850400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr19:44847400-44851400 ZNF genes & repeats Aorta Aorta
30 chr19:44847400-44855200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
31 chr19:44847600-44849000 Enhancers Primary B cells from peripheral blood blood
32 chr19:44847600-44849000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr19:44847600-44849000 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr19:44847600-44849000 ZNF genes & repeats Lung lung
35 chr19:44847800-44849200 Weak transcription Pancreas Pancrea
36 chr19:44847800-44850200 Weak transcription Esophagus oesophagus
37 chr19:44847800-44855400 Weak transcription Right Ventricle heart
38 chr19:44848000-44850600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr19:44848000-44851800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr19:44848200-44850200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr19:44848200-44852200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr19:44848200-44853400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr19:44848200-44854800 Weak transcription Fetal Brain Male brain
44 chr19:44848400-44849000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr19:44848400-44849600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr19:44848600-44849200 Strong transcription Left Ventricle heart
47 chr19:44848600-44849800 Enhancers Cortex derived primary cultured neurospheres brain
48 chr19:44848600-44849800 Enhancers Brain Substantia Nigra brain
49 chr19:44848600-44851000 Enhancers Brain Anterior Caudate brain
50 chr19:44848800-44849000 Enhancers Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015