Variant report
| Variant | rs7252577 |
|---|---|
| Chromosome Location | chr19:44822398-44822399 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:39)
| rs_ID | r2[population] |
|---|---|
| rs1011567 | 0.85[ASN][1000 genomes] |
| rs10775542 | 0.88[EUR][1000 genomes] |
| rs11667521 | 0.87[EUR][1000 genomes] |
| rs11670157 | 0.87[AMR][1000 genomes];0.94[ASN][1000 genomes] |
| rs12151072 | 0.86[ASN][1000 genomes] |
| rs12462557 | 0.87[EUR][1000 genomes] |
| rs12462723 | 0.87[EUR][1000 genomes] |
| rs12972550 | 0.88[ASN][1000 genomes] |
| rs12975315 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs12975546 | 0.82[EUR][1000 genomes] |
| rs12980565 | 0.82[EUR][1000 genomes] |
| rs12981298 | 0.84[AMR][1000 genomes];0.94[ASN][1000 genomes] |
| rs1434575 | 0.86[ASN][1000 genomes] |
| rs1434576 | 0.86[ASN][1000 genomes] |
| rs1897826 | 0.85[ASN][1000 genomes] |
| rs2014501 | 0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes] |
| rs2125578 | 0.82[EUR][1000 genomes] |
| rs2125579 | 0.82[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs2196184 | 0.85[ASN][1000 genomes] |
| rs2196186 | 0.85[ASN][1000 genomes] |
| rs2196187 | 0.85[ASN][1000 genomes] |
| rs2279073 | 0.82[EUR][1000 genomes] |
| rs2356881 | 0.85[ASN][1000 genomes] |
| rs4802218 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs4803694 | 0.87[EUR][1000 genomes] |
| rs4803697 | 0.86[ASN][1000 genomes] |
| rs6509150 | 0.87[EUR][1000 genomes] |
| rs67711424 | 0.83[AMR][1000 genomes];0.90[ASN][1000 genomes] |
| rs7251134 | 0.85[ASN][1000 genomes] |
| rs7256402 | 0.81[AMR][1000 genomes];0.92[ASN][1000 genomes] |
| rs733265 | 0.84[AMR][1000 genomes];0.97[ASN][1000 genomes] |
| rs8101032 | 0.82[EUR][1000 genomes] |
| rs8104642 | 0.85[ASN][1000 genomes] |
| rs8105073 | 0.83[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs8106766 | 0.87[EUR][1000 genomes] |
| rs8109462 | 0.81[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs9646643 | 0.82[EUR][1000 genomes] |
| rs9676368 | 0.82[AMR][1000 genomes];0.92[ASN][1000 genomes] |
| rs984117 | 0.88[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr19:44814600-44824600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
