The 2.0 version of rSNPBase

Variant report

Variant rs6509150
Chromosome Location chr19:44772588-44772589
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44730000-44775600 ZNF genes & repeats Liver Liver
2 chr19:44764600-44778200 Weak transcription HSMMtube muscle
3 chr19:44764800-44777600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr19:44764800-44777600 Weak transcription Placenta Placenta
5 chr19:44764800-44782000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr19:44765000-44772600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:44765000-44773400 Weak transcription H9 Cell Line embryonic stem cell
8 chr19:44765000-44774800 Weak transcription Fetal Lung lung
9 chr19:44765000-44774800 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr19:44765000-44775400 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr19:44765000-44777400 Weak transcription H1 Cell Line embryonic stem cell
12 chr19:44765000-44777400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr19:44765000-44777400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr19:44765000-44777400 Weak transcription Fetal Heart heart
15 chr19:44765000-44777600 Weak transcription HUES6 Cell Line embryonic stem cell
16 chr19:44765000-44777600 Weak transcription Right Ventricle heart
17 chr19:44765000-44778000 Weak transcription Fetal Brain Male brain
18 chr19:44765200-44777000 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr19:44765200-44777600 Weak transcription Dnd41 blood
20 chr19:44765400-44773600 Weak transcription HepG2 liver
21 chr19:44765400-44777600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr19:44767600-44777400 Weak transcription Brain Angular Gyrus brain
23 chr19:44769200-44773200 Strong transcription Brain Germinal Matrix brain
24 chr19:44769600-44772600 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr19:44769800-44775200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
26 chr19:44769800-44775600 Strong transcription Primary T cells from cord blood blood
27 chr19:44770000-44773000 Strong transcription Fetal Adrenal Gland Adrenal Gland
28 chr19:44770000-44773200 Strong transcription Fetal Brain Female brain
29 chr19:44770000-44773400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr19:44770000-44780800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr19:44770200-44772800 Strong transcription Fetal Stomach stomach
32 chr19:44770200-44772800 Strong transcription Skeletal Muscle Male skeletal muscle
33 chr19:44770200-44773000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
34 chr19:44770400-44772800 ZNF genes & repeats Duodenum Mucosa Duodenum
35 chr19:44770400-44773000 Strong transcription Brain Cingulate Gyrus brain
36 chr19:44770400-44773200 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr19:44770600-44777400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr19:44770600-44777600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr19:44771000-44773000 Strong transcription Brain Anterior Caudate brain
40 chr19:44771000-44775600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr19:44771000-44777600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr19:44771200-44772800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
43 chr19:44771200-44775200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr19:44771400-44772600 Weak transcription Adipose Nuclei Adipose
45 chr19:44771400-44772800 Strong transcription Fetal Intestine Large intestine
46 chr19:44771400-44772800 Strong transcription Rectal Mucosa Donor 29 rectum
47 chr19:44771400-44773400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr19:44771400-44774400 Weak transcription Pancreas Pancrea
49 chr19:44771400-44777600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr19:44771400-44777600 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015