The 2.0 version of rSNPBase

Variant report

Variant rs4802217
Chromosome Location chr19:44773513-44773514
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44730000-44775600 ZNF genes & repeats Liver Liver
2 chr19:44764600-44778200 Weak transcription HSMMtube muscle
3 chr19:44764800-44777600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr19:44764800-44777600 Weak transcription Placenta Placenta
5 chr19:44764800-44782000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr19:44765000-44774800 Weak transcription Fetal Lung lung
7 chr19:44765000-44774800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr19:44765000-44775400 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr19:44765000-44777400 Weak transcription H1 Cell Line embryonic stem cell
10 chr19:44765000-44777400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr19:44765000-44777400 Weak transcription Brain Inferior Temporal Lobe brain
12 chr19:44765000-44777400 Weak transcription Fetal Heart heart
13 chr19:44765000-44777600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr19:44765000-44777600 Weak transcription Right Ventricle heart
15 chr19:44765000-44778000 Weak transcription Fetal Brain Male brain
16 chr19:44765200-44777000 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr19:44765200-44777600 Weak transcription Dnd41 blood
18 chr19:44765400-44773600 Weak transcription HepG2 liver
19 chr19:44765400-44777600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr19:44767600-44777400 Weak transcription Brain Angular Gyrus brain
21 chr19:44769800-44775200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr19:44769800-44775600 Strong transcription Primary T cells from cord blood blood
23 chr19:44770000-44780800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr19:44770600-44777400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr19:44770600-44777600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr19:44771000-44775600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr19:44771000-44777600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr19:44771200-44775200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr19:44771400-44774400 Weak transcription Pancreas Pancrea
30 chr19:44771400-44777600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr19:44771400-44777600 Weak transcription Rectal Smooth Muscle rectum
32 chr19:44771400-44778200 Weak transcription Fetal Kidney kidney
33 chr19:44771600-44777400 Weak transcription Primary B cells from cord blood blood
34 chr19:44771600-44777600 Weak transcription Thymus Thymus
35 chr19:44772000-44774800 Weak transcription Stomach Smooth Muscle stomach
36 chr19:44772200-44774400 Weak transcription Fetal Intestine Small intestine
37 chr19:44772200-44774600 Weak transcription Aorta Aorta
38 chr19:44772200-44774600 Weak transcription Ovary ovary
39 chr19:44772200-44774800 Weak transcription Spleen Spleen
40 chr19:44772200-44777200 Weak transcription Fetal Muscle Trunk muscle
41 chr19:44772200-44777200 Weak transcription Fetal Muscle Leg muscle
42 chr19:44772200-44777400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr19:44772200-44777400 Weak transcription Psoas Muscle Psoas
44 chr19:44772200-44777600 Weak transcription Left Ventricle heart
45 chr19:44772800-44774600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr19:44772800-44774600 Weak transcription Duodenum Mucosa Duodenum
47 chr19:44772800-44774600 Weak transcription Fetal Stomach stomach
48 chr19:44772800-44774600 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr19:44772800-44774800 Weak transcription Colon Smooth Muscle Colon
50 chr19:44772800-44774800 Weak transcription Fetal Intestine Large intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015