Variant report

Variant	rs8102037
Chromosome Location	chr19:44737839-44737840
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:44737360..44739314-chr19:44742429..44745029,2	MCF-7	breast:
2	chr19:44731816..44734081-chr19:44735997..44738097,2	K562	blood:

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10405450	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10410086	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10423306	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10425945	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10775542	0.81[EUR][1000 genomes]
rs11667521	0.82[EUR][1000 genomes]
rs12462557	0.82[EUR][1000 genomes]
rs12462723	0.82[EUR][1000 genomes]
rs12975315	0.81[EUR][1000 genomes]
rs12975546	0.87[EUR][1000 genomes]
rs12980565	0.87[EUR][1000 genomes]
rs2125578	0.87[EUR][1000 genomes]
rs2125579	0.81[EUR][1000 genomes]
rs2168989	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2232801	0.80[AFR][1000 genomes];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2279072	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2279073	0.87[EUR][1000 genomes]
rs4802218	0.81[EUR][1000 genomes]
rs4803694	0.82[EUR][1000 genomes]
rs6509150	0.82[EUR][1000 genomes]
rs7248114	0.89[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7251682	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7253533	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7259916	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7260304	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs8101032	0.87[EUR][1000 genomes]
rs8105073	0.82[EUR][1000 genomes]
rs8106766	0.82[EUR][1000 genomes]
rs8109462	0.80[EUR][1000 genomes]
rs9304640	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9646642	0.83[EUR][1000 genomes]
rs9646643	0.87[EUR][1000 genomes]

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:44717400-44739000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr19:44717600-44739600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr19:44718200-44738800	Weak transcription	Hela-S3	cervix
4	chr19:44723600-44738000	Weak transcription	NHEK	skin
5	chr19:44729800-44741000	ZNF genes & repeats	Lung	lung
6	chr19:44729800-44768600	ZNF genes & repeats	Adipose Nuclei	Adipose
7	chr19:44730000-44741200	ZNF genes & repeats	Ovary	ovary
8	chr19:44730000-44741400	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
9	chr19:44730000-44742000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
10	chr19:44730000-44743600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr19:44730000-44745000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr19:44730000-44775600	ZNF genes & repeats	Liver	Liver
13	chr19:44730200-44739600	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr19:44730200-44741200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr19:44730200-44741200	ZNF genes & repeats	Aorta	Aorta
16	chr19:44730200-44743000	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
17	chr19:44730200-44743400	ZNF genes & repeats	Fetal Lung	lung
18	chr19:44730200-44754600	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
19	chr19:44730400-44743400	Strong transcription	Cortex derived primary cultured neurospheres	brain
20	chr19:44730800-44739800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr19:44730800-44741000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr19:44731000-44739400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr19:44731000-44740800	ZNF genes & repeats	Primary Natural Killer cells fromperipheralblood	blood
24	chr19:44731000-44742000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr19:44731000-44744400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
26	chr19:44731200-44739800	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr19:44731200-44741400	ZNF genes & repeats	Primary neutrophils fromperipheralblood	blood
28	chr19:44731400-44738000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr19:44731400-44739800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr19:44731400-44741400	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
31	chr19:44731400-44742000	ZNF genes & repeats	Fetal Intestine Small	intestine
32	chr19:44731600-44739400	Strong transcription	HSMMtube	muscle
33	chr19:44731600-44739800	Strong transcription	HUES6 Cell Line	embryonic stem cell
34	chr19:44731600-44741000	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
35	chr19:44731600-44741000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
36	chr19:44731600-44741200	Strong transcription	Placenta Amnion	Placenta Amnion
37	chr19:44731600-44741200	ZNF genes & repeats	Sigmoid Colon	Sigmoid Colon
38	chr19:44731800-44738000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr19:44731800-44739400	Strong transcription	Right Ventricle	heart
40	chr19:44731800-44741000	ZNF genes & repeats	Primary mononuclear cells fromperipheralblood	Blood
41	chr19:44731800-44741000	ZNF genes & repeats	Small Intestine	intestine
42	chr19:44731800-44741200	Strong transcription	Placenta	Placenta
43	chr19:44731800-44741200	Strong transcription	Fetal Thymus	thymus
44	chr19:44731800-44741400	ZNF genes & repeats	Colon Smooth Muscle	Colon
45	chr19:44731800-44744200	ZNF genes & repeats	Primary hematopoietic stem cells	blood
46	chr19:44732000-44739400	Strong transcription	Brain Cingulate Gyrus	brain
47	chr19:44732000-44739600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr19:44732000-44739600	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
49	chr19:44732000-44741200	ZNF genes & repeats	Fetal Kidney	kidney
50	chr19:44732400-44739600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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