Variant report

Variant	rs1477536
Chromosome Location	chr10:95641536-95641537
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FRA10AC1-3	chr10:95641050-95641695	NONHSAT015699

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs1046414	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10748616	0.91[ASN][1000 genomes]
rs10786148	1.00[JPT][hapmap]
rs10882364	1.00[JPT][hapmap]
rs11187724	1.00[JPT][hapmap]
rs11187725	1.00[JPT][hapmap]
rs12098741	1.00[JPT][hapmap]
rs1425302	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17412233	1.00[JPT][hapmap]
rs1924702	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2093927	0.91[ASN][1000 genomes]
rs2422329	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3088126	1.00[JPT][hapmap]
rs4917956	1.00[JPT][hapmap]
rs4919543	0.91[ASN][1000 genomes]
rs6583920	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7075027	1.00[YRI][hapmap]
rs7086303	1.00[JPT][hapmap]
rs7088236	1.00[JPT][hapmap]
rs7089649	1.00[YRI][hapmap]
rs7093763	1.00[JPT][hapmap]
rs7094460	1.00[JPT][hapmap]
rs7094662	1.00[JPT][hapmap]
rs7094961	1.00[JPT][hapmap]
rs7098106	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs714187	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7898970	1.00[JPT][hapmap]
rs7903507	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7906044	1.00[JPT][hapmap]
rs7910246	1.00[JPT][hapmap]
rs7913238	1.00[JPT][hapmap]
rs7913668	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7917744	1.00[JPT][hapmap]
rs7921454	1.00[JPT][hapmap]
rs7922581	1.00[JPT][hapmap]
rs7922879	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs890162	0.96[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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