Variant report

Variant	rs1482262
Chromosome Location	chr8:49598167-49598168
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49597816..49599346-chr8:49601889..49603913,2	K562	blood:

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10090819	0.85[CHB][hapmap]
rs10101066	0.80[JPT][hapmap]
rs1074382	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10808720	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10957199	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1126259	0.80[JPT][hapmap]
rs12548278	0.82[ASW][hapmap];0.80[JPT][hapmap]
rs13251991	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13276316	0.85[CHB][hapmap]
rs1482261	0.85[CHB][hapmap];0.80[JPT][hapmap]
rs1871889	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2891648	0.85[CHB][hapmap];0.80[JPT][hapmap]
rs3750259	1.00[YRI][hapmap]
rs4873285	0.80[JPT][hapmap]
rs4873286	0.96[ASN][1000 genomes]
rs4873288	0.80[JPT][hapmap]
rs4873289	0.91[ASW][hapmap];0.85[CHB][hapmap];0.95[JPT][hapmap];0.90[MKK][hapmap]
rs7835152	0.85[CHB][hapmap]
rs900237	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs900238	0.85[CHB][hapmap];0.87[CHD][hapmap];0.87[GIH][hapmap];0.80[JPT][hapmap]
rs9298058	0.80[JPT][hapmap]
rs9332436	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs966703	0.80[JPT][hapmap]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49592200-49600600	Weak transcription	Lung	lung
2	chr8:49595800-49601800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr8:49595800-49607600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr8:49595800-49616800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr8:49596200-49598400	Weak transcription	Fetal Muscle Leg	muscle
6	chr8:49596400-49598400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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