Variant report
Variant | rs1486471 |
---|---|
Chromosome Location | chr8:51071742-51071743 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10098057 | 0.82[CEU][hapmap];0.86[MEX][hapmap];0.81[MKK][hapmap];0.81[TSI][hapmap];0.89[EUR][1000 genomes] |
rs10504098 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs10957813 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs10957814 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs11775978 | 0.87[EUR][1000 genomes] |
rs11778998 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs11780070 | 0.85[EUR][1000 genomes] |
rs11781981 | 0.87[EUR][1000 genomes] |
rs11786703 | 0.85[EUR][1000 genomes] |
rs11986160 | 0.82[CEU][hapmap] |
rs11991940 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs12542067 | 0.82[CEU][hapmap];0.86[MEX][hapmap];0.81[MKK][hapmap];0.89[EUR][1000 genomes] |
rs12543077 | 0.91[MEX][hapmap] |
rs12545915 | 0.86[MEX][hapmap] |
rs13260265 | 0.82[CEU][hapmap] |
rs13277538 | 0.87[EUR][1000 genomes] |
rs1450127 | 0.81[EUR][1000 genomes] |
rs1597426 | 0.82[MEX][hapmap] |
rs1597430 | 0.86[MEX][hapmap] |
rs16914346 | 0.82[CEU][hapmap] |
rs16914376 | 0.87[EUR][1000 genomes] |
rs16914459 | 0.87[EUR][1000 genomes] |
rs17758599 | 0.82[MEX][hapmap] |
rs203612 | 0.82[MEX][hapmap] |
rs203632 | 0.82[MEX][hapmap] |
rs203908 | 0.82[MEX][hapmap] |
rs203930 | 0.88[ASW][hapmap];0.85[LWK][hapmap];0.82[MEX][hapmap] |
rs203932 | 0.82[MEX][hapmap] |
rs203940 | 0.82[MEX][hapmap] |
rs2084590 | 0.82[EUR][1000 genomes] |
rs2084591 | 0.82[EUR][1000 genomes] |
rs2385812 | 0.86[MEX][hapmap] |
rs34722367 | 0.87[EUR][1000 genomes] |
rs34997857 | 0.89[EUR][1000 genomes] |
rs36006902 | 0.87[EUR][1000 genomes] |
rs4143633 | 0.86[CEU][hapmap];0.95[CHB][hapmap];0.94[JPT][hapmap] |
rs4448283 | 0.82[EUR][1000 genomes] |
rs4448284 | 0.86[MEX][hapmap] |
rs4873126 | 0.88[EUR][1000 genomes] |
rs4873127 | 0.88[EUR][1000 genomes] |
rs4873128 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873129 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873131 | 0.83[EUR][1000 genomes] |
rs4873132 | 0.82[EUR][1000 genomes] |
rs4873133 | 0.82[EUR][1000 genomes] |
rs4873134 | 0.82[EUR][1000 genomes] |
rs4873135 | 0.86[MEX][hapmap];0.82[EUR][1000 genomes] |
rs4873408 | 0.82[CEU][hapmap];0.86[MEX][hapmap];0.81[MKK][hapmap];0.81[TSI][hapmap];0.88[EUR][1000 genomes] |
rs4873411 | 0.82[CEU][hapmap] |
rs4873412 | 0.88[EUR][1000 genomes] |
rs4873413 | 0.88[EUR][1000 genomes] |
rs4873414 | 0.87[EUR][1000 genomes] |
rs4873415 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873416 | 0.87[EUR][1000 genomes] |
rs4873417 | 0.82[CEU][hapmap];0.88[EUR][1000 genomes] |
rs4873418 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873419 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873420 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873421 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs4873426 | 0.83[EUR][1000 genomes] |
rs4873427 | 0.82[EUR][1000 genomes] |
rs4873428 | 0.86[MEX][hapmap];0.82[EUR][1000 genomes] |
rs4873431 | 0.86[MEX][hapmap] |
rs4873433 | 0.86[MEX][hapmap] |
rs56007637 | 0.88[EUR][1000 genomes] |
rs62516672 | 0.87[EUR][1000 genomes] |
rs62516685 | 0.87[EUR][1000 genomes] |
rs62516687 | 0.87[EUR][1000 genomes] |
rs6983498 | 0.86[MEX][hapmap];0.82[EUR][1000 genomes] |
rs6986896 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs6988843 | 0.82[CEU][hapmap];0.82[MEX][hapmap];0.86[EUR][1000 genomes] |
rs6991753 | 0.89[EUR][1000 genomes] |
rs6999627 | 0.82[MEX][hapmap] |
rs6999722 | 0.84[CEU][hapmap] |
rs6999870 | 0.82[CEU][hapmap] |
rs7001686 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs7002235 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs7004088 | 0.82[CEU][hapmap] |
rs7010037 | 0.88[EUR][1000 genomes] |
rs7016161 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs7018082 | 0.81[EUR][1000 genomes] |
rs7386487 | 0.87[EUR][1000 genomes] |
rs7817040 | 0.83[EUR][1000 genomes] |
rs7817638 | 0.83[EUR][1000 genomes] |
rs7824938 | 0.87[EUR][1000 genomes] |
rs7825053 | 0.87[EUR][1000 genomes] |
rs7825063 | 0.82[CEU][hapmap];0.88[EUR][1000 genomes] |
rs7835849 | 0.83[EUR][1000 genomes] |
rs870754 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs884561 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs898520 | 0.82[CEU][hapmap];0.87[EUR][1000 genomes] |
rs9298278 | 0.82[CEU][hapmap];0.86[MEX][hapmap];0.81[MKK][hapmap] |
rs9298279 | 0.82[CEU][hapmap];0.86[MEX][hapmap];0.81[MKK][hapmap];0.81[TSI][hapmap] |
rs987356 | 0.82[CEU][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3353749 | chr8:50530807-51139242 | Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv916392 | chr8:50827638-51395140 | Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
3 | esv2759613 | chr8:50873293-51137995 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
4 | esv2758621 | chr8:50886593-51137995 | Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
5 | esv1829361 | chr8:51021638-51101126 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
6 | nsv1027998 | chr8:51032883-51084279 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
7 | nsv539607 | chr8:51032883-51084279 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
8 | nsv1027984 | chr8:51060895-51098808 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS | TF binding regionCpG islandlncRNA | 1 gene(s) | inside rSNPs | diseases |
9 | nsv1022362 | chr8:51071742-51093985 | Enhancers ZNF genes & repeats Weak transcription Strong transcription | TF binding regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
No data |