Variant report

Variant	rs870754
Chromosome Location	chr8:51102888-51102889
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 241 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:237)

rs_ID	r²[population]
rs1000638	0.95[CEU][hapmap];0.90[CHB][hapmap];0.95[CHD][hapmap];0.90[GIH][hapmap];0.93[JPT][hapmap];0.85[MEX][hapmap];0.89[ASN][1000 genomes]
rs1000639	0.95[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs10086867	0.93[JPT][hapmap]
rs10093604	0.80[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs10094935	0.81[CHD][hapmap];0.93[JPT][hapmap]
rs10095985	0.80[CEU][hapmap];0.87[JPT][hapmap]
rs10096871	0.95[CEU][hapmap];0.90[CHB][hapmap];0.95[CHD][hapmap];0.90[GIH][hapmap];0.93[JPT][hapmap];0.92[ASN][1000 genomes]
rs10098057	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[GIH][hapmap];0.93[JPT][hapmap];0.87[TSI][hapmap];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10108468	0.81[CHD][hapmap]
rs10109835	0.88[JPT][hapmap]
rs10504094	0.95[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.89[ASN][1000 genomes]
rs10504096	0.95[CEU][hapmap];0.90[CHB][hapmap];0.86[JPT][hapmap];0.93[ASN][1000 genomes]
rs10504098	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.81[GIH][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.94[TSI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10504099	0.85[CEU][hapmap];0.93[JPT][hapmap];0.83[EUR][1000 genomes]
rs10808817	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs10957764	0.95[CEU][hapmap]
rs10957813	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10957814	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10957828	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs10957853	0.92[JPT][hapmap];0.83[EUR][1000 genomes]
rs1160795	0.83[CHD][hapmap]
rs11775978	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11778998	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11780070	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11781074	0.95[CEU][hapmap]
rs11781981	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11784719	0.93[JPT][hapmap]
rs11786703	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11986160	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.90[MEX][hapmap];0.94[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap]
rs11989367	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11991940	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12056425	0.85[CEU][hapmap];0.93[JPT][hapmap];0.84[EUR][1000 genomes]
rs12056426	0.85[CEU][hapmap];0.93[JPT][hapmap];0.84[EUR][1000 genomes]
rs12542067	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.90[TSI][hapmap];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12544473	1.00[JPT][hapmap]
rs12544631	0.93[JPT][hapmap]
rs12544986	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12545107	0.95[CEU][hapmap]
rs12545263	0.93[ASN][1000 genomes]
rs12545365	0.83[EUR][1000 genomes]
rs12545915	0.85[CEU][hapmap];0.93[JPT][hapmap];0.83[EUR][1000 genomes]
rs12545927	0.87[JPT][hapmap]
rs12677522	0.83[EUR][1000 genomes]
rs12677964	0.84[CEU][hapmap];0.85[JPT][hapmap];0.82[EUR][1000 genomes]
rs12679317	0.83[EUR][1000 genomes]
rs12679356	0.84[CEU][hapmap];0.85[JPT][hapmap];0.83[EUR][1000 genomes]
rs12680748	0.93[JPT][hapmap]
rs13248969	0.93[JPT][hapmap]
rs13249415	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs13251587	0.93[JPT][hapmap]
rs13251725	0.93[JPT][hapmap]
rs13252320	0.83[CEU][hapmap];0.92[JPT][hapmap]
rs13253758	0.93[JPT][hapmap]
rs13260021	0.92[JPT][hapmap]
rs13260265	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.87[MKK][hapmap];0.90[TSI][hapmap];0.88[YRI][hapmap]
rs13260288	0.81[CHD][hapmap];0.93[JPT][hapmap]
rs13270234	0.95[CEU][hapmap]
rs13271983	0.92[ASN][1000 genomes]
rs13275607	0.84[CEU][hapmap];0.84[JPT][hapmap]
rs13277538	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13278343	0.82[JPT][hapmap]
rs13282956	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs13340639	0.83[CEU][hapmap];0.89[CHB][hapmap];1.00[JPT][hapmap]
rs1349316	0.85[JPT][hapmap]
rs1349317	0.93[JPT][hapmap]
rs1375942	0.93[JPT][hapmap]
rs1375944	0.91[JPT][hapmap]
rs1375945	0.93[JPT][hapmap]
rs1375948	0.93[JPT][hapmap]
rs1380789	0.93[JPT][hapmap]
rs1380790	0.87[JPT][hapmap]
rs1380791	0.93[JPT][hapmap]
rs1380792	0.93[JPT][hapmap]
rs1450127	0.85[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1450132	0.93[JPT][hapmap]
rs1450135	0.93[JPT][hapmap]
rs1486471	0.82[CEU][hapmap]
rs149992	0.82[ASN][1000 genomes]
rs1597426	0.81[CHD][hapmap];0.93[JPT][hapmap]
rs1597428	0.85[CEU][hapmap];0.93[JPT][hapmap];0.81[EUR][1000 genomes]
rs1597429	0.83[EUR][1000 genomes]
rs1597430	0.84[CEU][hapmap];0.81[CHD][hapmap];0.93[JPT][hapmap];0.83[EUR][1000 genomes]
rs1597431	0.83[EUR][1000 genomes]
rs16914250	0.86[JPT][hapmap]
rs16914346	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.90[MEX][hapmap];0.94[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap]
rs16914376	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs16914459	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16914781	0.93[JPT][hapmap]
rs17686196	0.95[CEU][hapmap]
rs17758599	0.90[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.87[ASN][1000 genomes]
rs17770910	1.00[JPT][hapmap]
rs1824462	0.93[JPT][hapmap]
rs1868639	0.93[JPT][hapmap]
rs1901050	0.83[EUR][1000 genomes]
rs1901055	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs1901056	0.93[JPT][hapmap]
rs1903311	0.95[CEU][hapmap];0.90[CHB][hapmap];0.95[CHD][hapmap];0.93[GIH][hapmap];0.93[JPT][hapmap];0.80[MEX][hapmap];0.93[ASN][1000 genomes]
rs1906070	0.86[JPT][hapmap]
rs203612	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.93[ASN][1000 genomes]
rs203616	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs203621	0.90[ASN][1000 genomes]
rs203623	0.89[ASN][1000 genomes]
rs203624	0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs203626	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs203632	0.90[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.91[ASN][1000 genomes]
rs203908	0.82[CHB][hapmap];0.84[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.91[ASN][1000 genomes]
rs203925	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs203928	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs203930	0.82[CHB][hapmap];0.82[MEX][hapmap]
rs203932	0.90[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.89[ASN][1000 genomes]
rs203933	0.89[ASN][1000 genomes]
rs203935	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs203936	0.89[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs203937	0.91[ASN][1000 genomes]
rs203938	0.91[ASN][1000 genomes]
rs203939	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs203940	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.91[ASN][1000 genomes]
rs203942	0.82[CHB][hapmap]
rs203947	0.90[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs203949	0.80[CHB][hapmap];0.91[CHD][hapmap];0.93[JPT][hapmap];0.80[MEX][hapmap];0.90[ASN][1000 genomes]
rs203960	0.90[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs2084589	0.81[EUR][1000 genomes]
rs2084590	0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2084591	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2106156	0.95[CEU][hapmap]
rs2157736	0.95[CEU][hapmap]
rs2167157	0.93[JPT][hapmap]
rs2385812	0.85[CEU][hapmap];0.90[CHB][hapmap];0.92[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap]
rs2923059	0.93[JPT][hapmap]
rs2923062	0.93[JPT][hapmap]
rs2957600	0.93[JPT][hapmap]
rs2957601	0.93[JPT][hapmap]
rs34047312	0.93[ASN][1000 genomes]
rs34217744	0.85[AMR][1000 genomes]
rs34641787	0.93[ASN][1000 genomes]
rs34722367	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34788367	0.86[EUR][1000 genomes]
rs34908431	0.86[EUR][1000 genomes]
rs34997857	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35516514	0.84[AMR][1000 genomes]
rs35857674	0.84[AMR][1000 genomes]
rs35989044	0.89[ASN][1000 genomes]
rs36006902	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4147344	0.93[JPT][hapmap]
rs420489	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4292700	0.93[JPT][hapmap]
rs4330704	0.85[CEU][hapmap];0.92[JPT][hapmap]
rs4364645	0.93[JPT][hapmap]
rs4398931	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs4448283	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4448284	0.85[CEU][hapmap];0.81[CHD][hapmap];0.93[JPT][hapmap];0.84[EUR][1000 genomes]
rs4543555	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs4577969	0.85[CEU][hapmap];0.86[JPT][hapmap]
rs4633068	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs4873126	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4873127	0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4873128	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873129	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.90[MEX][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873131	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873132	0.90[CHB][hapmap];0.93[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873133	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873134	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873135	0.85[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873137	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs4873141	0.81[MEX][hapmap];0.83[AMR][1000 genomes]
rs4873142	0.93[JPT][hapmap]
rs4873405	0.95[CEU][hapmap];0.80[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs4873406	0.95[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs4873407	0.93[ASN][1000 genomes]
rs4873408	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4873411	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs4873412	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4873413	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873414	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873415	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4873416	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873417	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4873418	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873419	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873420	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873421	1.00[CEU][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4873426	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873427	0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873428	0.85[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4873431	0.85[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap]
rs4873433	0.85[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap]
rs4873438	0.85[AMR][1000 genomes]
rs4873439	0.81[MEX][hapmap];0.86[AMR][1000 genomes]
rs4873442	0.93[JPT][hapmap]
rs4873447	0.93[JPT][hapmap]
rs4873451	1.00[JPT][hapmap]
rs56007637	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56725	1.00[CHB][hapmap];0.93[JPT][hapmap];0.93[ASN][1000 genomes]
rs58958741	0.82[AFR][1000 genomes]
rs62515375	0.89[ASN][1000 genomes]
rs62516672	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62516685	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs62516687	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6472947	0.88[ASN][1000 genomes]
rs6981805	0.85[CEU][hapmap];0.93[JPT][hapmap]
rs6983498	0.85[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6986896	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6988843	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.92[TSI][hapmap];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6991753	0.90[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6996646	0.95[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap];0.92[ASN][1000 genomes]
rs6999627	0.93[JPT][hapmap]
rs6999722	1.00[CEU][hapmap];0.90[CHB][hapmap];0.93[JPT][hapmap]
rs6999870	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs7001686	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7002235	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7004088	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap]
rs7010037	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7013247	0.89[CHB][hapmap];0.93[JPT][hapmap]
rs7013995	0.95[CEU][hapmap];0.90[CHB][hapmap];0.92[JPT][hapmap];0.91[ASN][1000 genomes]
rs7016161	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7017642	0.93[JPT][hapmap]
rs7018082	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs721441	0.95[CEU][hapmap];0.90[CHB][hapmap];0.90[GIH][hapmap];0.93[JPT][hapmap];0.80[MEX][hapmap];0.92[ASN][1000 genomes]
rs7386487	0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7464491	0.85[CEU][hapmap];0.93[JPT][hapmap];0.84[EUR][1000 genomes]
rs7817040	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7817638	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7820951	0.92[ASN][1000 genomes]
rs7821189	0.93[JPT][hapmap]
rs7824938	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7825053	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7825063	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7835849	0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs884561	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs898520	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.97[TSI][hapmap];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9298278	1.00[CEU][hapmap];0.90[CHB][hapmap];0.91[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.85[TSI][hapmap]
rs9298279	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.86[GIH][hapmap];1.00[JPT][hapmap];0.87[TSI][hapmap]
rs9643720	0.85[CEU][hapmap]
rs968944	0.93[JPT][hapmap]
rs968945	0.93[JPT][hapmap]
rs968947	0.93[JPT][hapmap]
rs987356	0.93[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.90[MEX][hapmap];0.94[MKK][hapmap];0.90[TSI][hapmap];1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353749	chr8:50530807-51139242	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv916392	chr8:50827638-51395140	Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv2759613	chr8:50873293-51137995	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2758621	chr8:50886593-51137995	Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs870754	EFCAB1	cis	parietal	SCAN
rs870754	SNTG1	cis	cerebellum	SCAN

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:51101000-51104200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr8:51102200-51103000	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr8:51102400-51112400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

The 2.0 version of rSNPBase

Variant report

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