Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1156409	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16881433	0.92[EUR][1000 genomes]
rs16881439	0.88[EUR][1000 genomes]
rs16881449	0.88[EUR][1000 genomes]
rs16881450	0.88[EUR][1000 genomes]
rs16881458	0.88[EUR][1000 genomes]
rs16881463	0.88[EUR][1000 genomes]
rs16881683	1.00[JPT][hapmap]
rs2087093	0.92[EUR][1000 genomes]
rs2881952	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3920742	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4707928	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56699974	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs6453557	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73747164	0.92[EUR][1000 genomes]
rs73747165	0.85[EUR][1000 genomes]
rs73747166	0.92[EUR][1000 genomes]
rs9293845	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9442674	0.92[EUR][1000 genomes]
rs9446403	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830685	chr6:72244007-72410757	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72302200-72307600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:72302400-72303800	Weak transcription	Adipose Nuclei	Adipose

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