Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1512430	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34555310	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34932346	0.93[AFR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs482942	1.00[CHB][hapmap]
rs494766	0.82[ASN][1000 genomes]
rs497271	0.82[ASN][1000 genomes]
rs501889	0.82[ASN][1000 genomes]
rs527993	0.82[ASN][1000 genomes]
rs529861	0.82[ASN][1000 genomes]
rs586279	0.82[ASN][1000 genomes]
rs591957	1.00[CHB][hapmap]
rs601181	0.82[ASN][1000 genomes]
rs606871	1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.82[JPT][hapmap];0.83[LWK][hapmap];0.82[ASN][1000 genomes]
rs608643	1.00[CHB][hapmap]
rs629793	0.82[ASN][1000 genomes]
rs645748	0.82[ASN][1000 genomes]
rs659327	0.82[ASN][1000 genomes]
rs660564	1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs661099	0.82[ASN][1000 genomes]
rs669266	0.82[ASN][1000 genomes]
rs671671	1.00[CHB][hapmap];0.82[JPT][hapmap];0.82[ASN][1000 genomes]
rs684242	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1048381	chr11:105945117-106561574	Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv2754854	chr11:106092790-106245790	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1054471	chr11:106168484-106427713	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	nsv1041862	chr11:106210820-106238696	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2760288	chr11:106214708-106238708	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2752861	chr11:106216510-106245491	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106232600-106235400	Weak transcription	Pancreas	Pancrea

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