Variant report
Variant | rs1527650 |
---|---|
Chromosome Location | chr7:120243576-120243577 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr7:120237810..120240402-chr7:120242106..120244739,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10085583 | 0.82[ASN][1000 genomes] |
rs10156125 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs10224280 | 0.82[ASN][1000 genomes] |
rs10224891 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs10226133 | 1.00[CEU][hapmap] |
rs10227379 | 1.00[CHD][hapmap] |
rs10228326 | 0.82[ASN][1000 genomes] |
rs10239065 | 0.96[ASN][1000 genomes] |
rs10242908 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs10243095 | 0.82[ASN][1000 genomes] |
rs10245675 | 0.82[ASN][1000 genomes] |
rs10247657 | 0.82[ASN][1000 genomes] |
rs10248007 | 0.82[ASN][1000 genomes] |
rs10253512 | 0.82[ASN][1000 genomes] |
rs10257987 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs10261574 | 0.82[ASN][1000 genomes] |
rs10262476 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs10265695 | 0.82[ASN][1000 genomes] |
rs10268591 | 1.00[CHD][hapmap] |
rs10270560 | 0.82[ASN][1000 genomes] |
rs10270911 | 0.82[ASN][1000 genomes] |
rs10272611 | 0.82[ASN][1000 genomes] |
rs10272979 | 0.96[ASN][1000 genomes] |
rs10273127 | 0.96[ASN][1000 genomes] |
rs10273242 | 0.82[ASN][1000 genomes] |
rs10277086 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs10282150 | 0.82[ASN][1000 genomes] |
rs10488302 | 1.00[CHD][hapmap] |
rs11536582 | 0.82[ASN][1000 genomes] |
rs12111645 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs12111791 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs12171571 | 0.82[ASN][1000 genomes] |
rs13241174 | 0.80[EUR][1000 genomes] |
rs13438753 | 0.96[ASN][1000 genomes] |
rs1527654 | 0.82[ASN][1000 genomes] |
rs1609181 | 1.00[CHD][hapmap] |
rs17142782 | 1.00[CHD][hapmap] |
rs17142838 | 1.00[CEU][hapmap];0.94[EUR][1000 genomes] |
rs17281865 | 1.00[CEU][hapmap];1.00[GIH][hapmap];0.84[TSI][hapmap];0.94[EUR][1000 genomes] |
rs17347747 | 1.00[CEU][hapmap];0.93[GIH][hapmap];0.84[TSI][hapmap];0.94[EUR][1000 genomes] |
rs2049643 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs41424845 | 0.85[GIH][hapmap] |
rs4540347 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |
rs4730964 | 1.00[CEU][hapmap];1.00[GIH][hapmap];0.84[TSI][hapmap];0.94[EUR][1000 genomes] |
rs58555874 | 0.97[EUR][1000 genomes] |
rs59156163 | 0.94[EUR][1000 genomes] |
rs59575769 | 0.94[EUR][1000 genomes] |
rs60150466 | 0.97[EUR][1000 genomes] |
rs6466749 | 0.82[ASN][1000 genomes] |
rs73439878 | 0.94[EUR][1000 genomes] |
rs73441843 | 0.97[EUR][1000 genomes] |
rs7357256 | 0.82[ASN][1000 genomes] |
rs73721419 | 0.94[EUR][1000 genomes] |
rs73721426 | 0.94[EUR][1000 genomes] |
rs7790895 | 0.85[GIH][hapmap] |
rs7808927 | 0.96[ASN][1000 genomes] |
rs7812111 | 0.85[GIH][hapmap] |
rs9640793 | 0.89[ASN][1000 genomes] |
rs9641644 | 0.89[ASN][1000 genomes] |
rs9641645 | 0.89[ASN][1000 genomes] |
rs9886093 | 0.82[ASN][1000 genomes] |
rs9886190 | 1.00[CHD][hapmap];0.82[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv889117 | chr7:120122040-120266458 | Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr7:120225600-120249000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
2 | chr7:120242800-120244200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
3 | chr7:120243400-120244000 | Enhancers | Adipose Nuclei | Adipose |