Variant report

Variant	rs153071
Chromosome Location	chr5:94244650-94244651
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94165904..94166917-chr5:94244310..94245184,3	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs159026	0.88[ASN][1000 genomes]
rs159038	0.82[JPT][hapmap];1.00[MEX][hapmap];0.88[ASN][1000 genomes]
rs159490	0.82[JPT][hapmap];1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17084199	1.00[CHB][hapmap];1.00[AMR][1000 genomes]
rs17084201	1.00[CHB][hapmap];1.00[AMR][1000 genomes]
rs17084215	1.00[CHB][hapmap];1.00[AMR][1000 genomes]
rs2277012	1.00[CHB][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs248676	0.88[ASN][1000 genomes]
rs26996	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs27918	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94226200-94249000	Weak transcription	Left Ventricle	heart
2	chr5:94230400-94248400	Weak transcription	Thymus	Thymus
3	chr5:94233400-94251600	Strong transcription	Monocytes-CD14+_RO01746	blood
4	chr5:94234000-94249000	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr5:94234400-94250000	Weak transcription	Fetal Thymus	thymus
6	chr5:94237800-94254200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr5:94238400-94249800	Weak transcription	Hela-S3	cervix
8	chr5:94239000-94248600	Strong transcription	Primary neutrophils fromperipheralblood	blood
9	chr5:94239800-94248200	Weak transcription	Muscle Satellite Cultured Cells	--
10	chr5:94239800-94255200	Weak transcription	Brain Germinal Matrix	brain
11	chr5:94240200-94248200	Weak transcription	Gastric	stomach
12	chr5:94241400-94248400	Weak transcription	Lung	lung
13	chr5:94241600-94247200	Weak transcription	GM12878-XiMat	blood
14	chr5:94241600-94250200	Weak transcription	Dnd41	blood
15	chr5:94241800-94246800	Weak transcription	Adipose Nuclei	Adipose
16	chr5:94241800-94255600	Weak transcription	Primary T cells from cord blood	blood
17	chr5:94242200-94248600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr5:94242200-94260400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
19	chr5:94242200-94266200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
20	chr5:94243200-94245400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr5:94243200-94247200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr5:94243400-94245400	Weak transcription	Primary hematopoietic stem cells	blood
23	chr5:94244200-94245000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr5:94244200-94248800	Strong transcription	HUVEC	blood vessel

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