Variant report

Variant	rs17084201
Chromosome Location	chr5:94224591-94224592
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94213491..94215711-chr5:94223968..94226547,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10068653	0.85[ASN][1000 genomes]
rs153071	1.00[CHB][hapmap];1.00[AMR][1000 genomes]
rs17084199	1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17084215	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2277012	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[MKK][hapmap];0.90[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs26996	1.00[AMR][1000 genomes]
rs27918	1.00[AMR][1000 genomes]
rs987550	0.85[ASN][1000 genomes]
rs987551	1.00[JPT][hapmap];0.85[ASN][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr5:94191000-94232200	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr5:94200800-94236600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr5:94204400-94240600	Weak transcription	Lung	lung
5	chr5:94206800-94230000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr5:94207000-94227000	Weak transcription	Primary hematopoietic stem cells	blood
7	chr5:94207200-94230000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr5:94207200-94240400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr5:94218000-94231000	Strong transcription	Primary monocytes fromperipheralblood	blood
10	chr5:94220000-94224600	Strong transcription	Primary neutrophils fromperipheralblood	blood
11	chr5:94220200-94238200	Weak transcription	Psoas Muscle	Psoas
12	chr5:94220800-94229200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
13	chr5:94220800-94230000	Weak transcription	Fetal Brain Female	brain
14	chr5:94221000-94224600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr5:94221000-94229200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
16	chr5:94221600-94226800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr5:94222400-94227000	Weak transcription	HUES48 Cell Line	embryonic stem cell
18	chr5:94223000-94224800	Strong transcription	HUVEC	blood vessel
19	chr5:94223600-94224800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:94223800-94227200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr5:94224200-94225000	Strong transcription	Primary T cells from cord blood	blood

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