Variant report

Variant	rs26996
Chromosome Location	chr5:94240484-94240485
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94234329..94237872-chr5:94238248..94241461,3	K562	blood:
2	chr5:94239647..94241678-chr5:94247268..94249334,2	MCF-7	breast:

rs_ID	r²[population]
rs153071	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs159026	0.88[ASN][1000 genomes]
rs159038	0.88[ASN][1000 genomes]
rs159490	1.00[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs17084199	1.00[AMR][1000 genomes]
rs17084201	1.00[AMR][1000 genomes]
rs17084215	1.00[AMR][1000 genomes]
rs2277012	1.00[AMR][1000 genomes]
rs248676	0.88[ASN][1000 genomes]
rs27918	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr5:94204400-94240600	Weak transcription	Lung	lung
3	chr5:94225800-94241600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr5:94226200-94249000	Weak transcription	Left Ventricle	heart
5	chr5:94229600-94242400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr5:94229600-94243000	Weak transcription	Brain Substantia Nigra	brain
7	chr5:94230400-94248400	Weak transcription	Thymus	Thymus
8	chr5:94230600-94241400	Weak transcription	Adipose Nuclei	Adipose
9	chr5:94233400-94251600	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr5:94234000-94249000	Strong transcription	Primary monocytes fromperipheralblood	blood
11	chr5:94234200-94241800	Strong transcription	Primary hematopoietic stem cells	blood
12	chr5:94234400-94240600	Weak transcription	Dnd41	blood
13	chr5:94234400-94250000	Weak transcription	Fetal Thymus	thymus
14	chr5:94237800-94240800	Weak transcription	GM12878-XiMat	blood
15	chr5:94237800-94241600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr5:94237800-94254200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr5:94238400-94249800	Weak transcription	Hela-S3	cervix
18	chr5:94239000-94248600	Strong transcription	Primary neutrophils fromperipheralblood	blood
19	chr5:94239200-94243400	Strong transcription	HUVEC	blood vessel
20	chr5:94239400-94241800	Strong transcription	Primary T cells from cord blood	blood
21	chr5:94239800-94243200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr5:94239800-94248200	Weak transcription	Muscle Satellite Cultured Cells	--
23	chr5:94239800-94255200	Weak transcription	Brain Germinal Matrix	brain
24	chr5:94240000-94242200	Weak transcription	Primary B cells from cord blood	blood
25	chr5:94240200-94248200	Weak transcription	Gastric	stomach
26	chr5:94240400-94241600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr5:94240400-94242200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
28	chr5:94240400-94243200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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