Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs1025312	0.86[CHB][hapmap];0.91[JPT][hapmap]
rs10459793	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs11646481	0.93[ASN][1000 genomes]
rs11647164	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs11866839	0.98[ASN][1000 genomes]
rs12708869	0.85[CHB][hapmap];0.81[JPT][hapmap]
rs12922230	0.92[ASN][1000 genomes]
rs12923516	0.95[ASN][1000 genomes]
rs12927264	0.91[ASN][1000 genomes]
rs1402020	0.83[YRI][hapmap]
rs1607696	0.86[ASN][1000 genomes]
rs16968039	0.91[ASN][1000 genomes]
rs185393	0.92[CEU][hapmap];0.86[CHB][hapmap];0.91[JPT][hapmap];0.84[AMR][1000 genomes]
rs1864147	0.96[ASN][1000 genomes]
rs2280394	0.82[JPT][hapmap]
rs2331446	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs35141	0.93[CEU][hapmap];0.86[JPT][hapmap];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35143	0.92[CEU][hapmap];0.86[JPT][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35153	0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35181	0.92[CEU][hapmap];0.85[CHB][hapmap];0.81[JPT][hapmap]
rs35184	0.92[CEU][hapmap];0.85[CHB][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes]
rs35186	0.92[CEU][hapmap];0.85[CHB][hapmap];0.90[JPT][hapmap]
rs35187	0.82[AMR][1000 genomes]
rs35190	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs35197	0.92[CEU][hapmap];0.85[JPT][hapmap];0.83[AMR][1000 genomes]
rs3760056	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs3826240	0.84[CHB][hapmap];0.90[JPT][hapmap]
rs4967877	0.83[ASN][1000 genomes]
rs4967879	0.85[CHB][hapmap];0.90[JPT][hapmap]
rs9930786	0.85[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948640	chr16:64859061-65112790	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv984501	chr16:64919797-64993897	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:64927800-64941800	Weak transcription	Osteobl	bone
2	chr16:64931200-64943800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr16:64935000-64943800	Weak transcription	Fetal Lung	lung

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