Variant report
Variant | rs154555 |
---|---|
Chromosome Location | chr5:115797852-115797853 |
allele | C/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:115774600-115811000 | Weak transcription | Small Intestine | intestine |
2 | chr5:115782200-115798200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
3 | chr5:115783600-115802200 | Weak transcription | Colonic Mucosa | Colon |
4 | chr5:115783600-115802200 | Weak transcription | Pancreas | Pancrea |
5 | chr5:115783600-115803400 | Weak transcription | Esophagus | oesophagus |
6 | chr5:115783600-115813000 | Weak transcription | Spleen | Spleen |
7 | chr5:115783600-115813200 | Weak transcription | Gastric | stomach |
8 | chr5:115783600-115829600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
9 | chr5:115783800-115803200 | Weak transcription | Liver | Liver |
10 | chr5:115784200-115800000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
11 | chr5:115785200-115800200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
12 | chr5:115788000-115813200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
13 | chr5:115789000-115800200 | Weak transcription | Psoas Muscle | Psoas |
14 | chr5:115789600-115812600 | Strong transcription | Fetal Intestine Large | intestine |
15 | chr5:115789800-115803200 | Weak transcription | Lung | lung |
16 | chr5:115790000-115800200 | Weak transcription | Fetal Intestine Small | intestine |
17 | chr5:115790400-115803200 | Weak transcription | Aorta | Aorta |
18 | chr5:115790400-115812400 | Weak transcription | HepG2 | liver |
19 | chr5:115790600-115800000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
20 | chr5:115790800-115798600 | Weak transcription | Brain Angular Gyrus | brain |
21 | chr5:115790800-115800000 | Weak transcription | Adipose Nuclei | Adipose |
22 | chr5:115790800-115800200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
23 | chr5:115790800-115802800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
24 | chr5:115791000-115800000 | Weak transcription | Primary B cells from cord blood | blood |
25 | chr5:115791000-115800200 | Weak transcription | Fetal Brain Female | brain |
26 | chr5:115791000-115800200 | Weak transcription | Left Ventricle | heart |
27 | chr5:115791000-115801600 | Weak transcription | Fetal Thymus | thymus |
28 | chr5:115791000-115802200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
29 | chr5:115791000-115802200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
30 | chr5:115791000-115802800 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
31 | chr5:115791000-115804000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
32 | chr5:115791000-115812400 | Weak transcription | Fetal Brain Male | brain |
33 | chr5:115791000-115812600 | Weak transcription | Ovary | ovary |
34 | chr5:115791400-115799400 | Weak transcription | Brain Cingulate Gyrus | brain |
35 | chr5:115791400-115802200 | Weak transcription | Primary T cells from cord blood | blood |
36 | chr5:115791400-115805400 | Weak transcription | HSMMtube | muscle |
37 | chr5:115791600-115809600 | Weak transcription | Right Atrium | heart |
38 | chr5:115791600-115838000 | Weak transcription | Right Ventricle | heart |
39 | chr5:115791800-115800200 | Weak transcription | Fetal Stomach | stomach |
40 | chr5:115792000-115805200 | Weak transcription | Primary hematopoietic stem cells | blood |
41 | chr5:115792000-115809200 | Weak transcription | Colon Smooth Muscle | Colon |
42 | chr5:115792400-115799200 | Weak transcription | Brain Substantia Nigra | brain |
43 | chr5:115792400-115800000 | Weak transcription | Rectal Smooth Muscle | rectum |
44 | chr5:115792600-115799400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
45 | chr5:115792600-115800400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
46 | chr5:115792600-115801200 | Weak transcription | Fetal Lung | lung |
47 | chr5:115792800-115802600 | Weak transcription | Fetal Kidney | kidney |
48 | chr5:115792800-115812600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
49 | chr5:115793600-115799600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
50 | chr5:115793800-115800000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |