Variant report
Variant | rs158412 |
---|---|
Chromosome Location | chr5:36855778-36855779 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:2 , 50 per page) page:
1
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rs_ID | r2[population] |
---|---|
rs12656269 | 0.90[ASN][1000 genomes] |
rs12658985 | 0.82[AMR][1000 genomes];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs12659960 | 0.90[ASN][1000 genomes] |
rs12659981 | 0.90[ASN][1000 genomes] |
rs12659983 | 0.90[ASN][1000 genomes] |
rs13183090 | 0.86[ASN][1000 genomes] |
rs151945 | 1.00[ASN][1000 genomes] |
rs151946 | 0.95[ASN][1000 genomes] |
rs151947 | 0.93[ASN][1000 genomes] |
rs158410 | 1.00[ASN][1000 genomes] |
rs158411 | 0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs158792 | 0.94[ASN][1000 genomes] |
rs158793 | 0.95[ASN][1000 genomes] |
rs158794 | 0.95[ASN][1000 genomes] |
rs158797 | 0.97[ASN][1000 genomes] |
rs158798 | 0.97[ASN][1000 genomes] |
rs158799 | 0.97[ASN][1000 genomes] |
rs158802 | 0.89[ASN][1000 genomes] |
rs159140 | 0.90[ASN][1000 genomes] |
rs159141 | 0.90[ASN][1000 genomes] |
rs167146 | 0.85[ASN][1000 genomes] |
rs16903459 | 0.84[ASN][1000 genomes] |
rs181755 | 1.00[ASN][1000 genomes] |
rs2133786 | 0.93[ASN][1000 genomes] |
rs245587 | 1.00[ASN][1000 genomes] |
rs245588 | 0.90[ASN][1000 genomes] |
rs292160 | 0.95[ASN][1000 genomes] |
rs292179 | 0.90[ASN][1000 genomes] |
rs292180 | 0.90[ASN][1000 genomes] |
rs292181 | 0.87[ASN][1000 genomes] |
rs292186 | 0.87[ASN][1000 genomes] |
rs292196 | 0.90[ASN][1000 genomes] |
rs293746 | 0.94[ASN][1000 genomes] |
rs293748 | 0.95[ASN][1000 genomes] |
rs293774 | 0.90[ASN][1000 genomes] |
rs294695 | 0.86[ASN][1000 genomes] |
rs34701667 | 0.96[ASN][1000 genomes] |
rs34920909 | 0.93[ASN][1000 genomes] |
rs35011787 | 0.87[ASN][1000 genomes] |
rs35135658 | 0.90[ASN][1000 genomes] |
rs35263618 | 0.93[ASN][1000 genomes] |
rs35701604 | 0.87[ASN][1000 genomes] |
rs35899185 | 0.93[ASN][1000 genomes] |
rs468022 | 0.87[ASN][1000 genomes] |
rs56261529 | 0.87[ASN][1000 genomes] |
rs58952013 | 0.90[ASN][1000 genomes] |
rs59889951 | 0.93[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv492319 | chr5:36570707-37061019 | Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 53 gene(s) | inside rSNPs | diseases |
2 | nsv525478 | chr5:36804225-37349895 | Strong transcription Transcr. at gene 5' and 3' Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 66 gene(s) | inside rSNPs | diseases |
3 | nsv532133 | chr5:36834932-36906436 | ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 40 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:36854400-36855800 | Enhancers | Ovary | ovary |