The 2.0 version of rSNPBase

Variant report

Variant rs158608
Chromosome Location chr5:107520048-107520049
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:107475200-107527400 Weak transcription Liver Liver
2 chr5:107476000-107535600 Weak transcription Left Ventricle heart
3 chr5:107480800-107521000 Weak transcription Primary hematopoietic stem cells blood
4 chr5:107495400-107548800 Weak transcription Pancreas Pancrea
5 chr5:107496800-107528800 Weak transcription Aorta Aorta
6 chr5:107504800-107525200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr5:107505400-107536800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr5:107505600-107521800 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr5:107506200-107529400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr5:107506600-107522800 Weak transcription Fetal Muscle Leg muscle
11 chr5:107506600-107524600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr5:107508400-107523400 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr5:107510000-107520800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr5:107510600-107532000 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr5:107510800-107521000 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr5:107511000-107528000 Weak transcription Fetal Intestine Small intestine
17 chr5:107511400-107548400 Weak transcription Primary B cells from cord blood blood
18 chr5:107514800-107522800 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr5:107516200-107584800 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr5:107516800-107551400 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr5:107517000-107529000 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr5:107517000-107571800 Weak transcription Primary T helper cells PMA-I stimulated --
23 chr5:107518000-107532000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr5:107518600-107521800 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr5:107518600-107523000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr5:107518800-107521000 Weak transcription Brain Hippocampus Middle brain
27 chr5:107518800-107527400 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:107519000-107521000 Weak transcription HSMM muscle
29 chr5:107519200-107520800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr5:107519200-107520800 Weak transcription Placenta Placenta
31 chr5:107519200-107522000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr5:107519400-107521000 Weak transcription Stomach Smooth Muscle stomach
33 chr5:107519400-107521200 Weak transcription Primary B cells from peripheral blood blood
34 chr5:107519400-107522000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr5:107519400-107527000 Weak transcription Fetal Muscle Trunk muscle
36 chr5:107519600-107522000 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr5:107519600-107527400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
38 chr5:107519800-107521400 Strong transcription Fetal Stomach stomach
39 chr5:107519800-107521400 Enhancers Ovary ovary
40 chr5:107520000-107522600 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr5:107520000-107524800 Weak transcription Brain Anterior Caudate brain

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Last update: Aug 31, 2015