Variant report

Variant	rs1610720
Chromosome Location	chr6:29761062-29761063
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:122)
Chromatin interactive
region (count:1)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:29760425-29761859	GM19193	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:29761042-29761092	AG09309	skin:	n/a
2	chr6:29761042-29761092	U87	brain:	n/a
3	chr6:29761042-29761092	ProgFib	skin:	n/a
4	chr6:29761042-29761092	PFSK-1	brain:	n/a
5	chr6:29761044-29761094	HPAEpiC	pulmonary alveolar:	n/a
6	chr6:29761044-29761094	Jurkat	blood:	n/a
7	chr6:29761044-29761094	ovcar-3	ovarian:	n/a
8	chr6:29761042-29761092	AG09319	gingival:	n/a
9	chr6:29761044-29761094	Caco-2	colon:	n/a
10	chr6:29761042-29761092	AG04450	lung:	fetal
11	chr6:29761044-29761094	HNPCEpiC	eye:	n/a
12	chr6:29761042-29761092	SK-N-SH_RA	brain:	n/a
13	chr6:29761044-29761094	HAEpiC	amniotic membrane:	n/a
14	chr6:29761042-29761092	MCF-7	breast:	n/a
15	chr6:29761044-29761094	U87	brain:	n/a
16	chr6:29761042-29761092	HMEC	breast:	n/a
17	chr6:29761042-29761092	HRPEpiC	eye:	n/a
18	chr6:29761042-29761092	HL-60	blood:	n/a
19	chr6:29761042-29761092	NHDF-neo	bronchial:	n/a
20	chr6:29761044-29761094	IMR90	lung:	fetal
21	chr6:29761042-29761092	PANC-1	pancreas:	n/a
22	chr6:29761044-29761094	GM12878	blood:	n/a
23	chr6:29761042-29761092	ovcar-3	ovarian:	n/a
24	chr6:29761042-29761092	A549	lung:	n/a
25	chr6:29761042-29761092	HepG2	liver:	n/a
26	chr6:29761042-29761092	GM12892	blood:	n/a
27	chr6:29761044-29761094	ECC-1	luminal epithelium:	n/a
28	chr6:29761044-29761094	Hepatocyte	liver:	n/a
29	chr6:29761044-29761094	HCM	heart:	n/a
30	chr6:29761044-29761094	HL-60	blood:	n/a
31	chr6:29761042-29761092	AoSMC	blood vessel:	n/a
32	chr6:29761044-29761094	HEEpiC	esophagus:	n/a
33	chr6:29761042-29761092	GM06990	blood:	n/a
34	chr6:29761044-29761094	HEK293	kidney:	embryo
35	chr6:29761042-29761092	HPAEpiC	pulmonary alveolar:	n/a
36	chr6:29761042-29761092	BE2_C	brain:	n/a
37	chr6:29761042-29761092	NHBE	bronchial:	n/a
38	chr6:29761042-29761092	MCF10A-Er-Src	breast:	n/a
39	chr6:29761044-29761094	NH-A	brain:	n/a
40	chr6:29761044-29761094	SK-N-SH_RA	brain:	n/a
41	chr6:29761042-29761092	H1-hESC	embryonic stem cell:	embryo
42	chr6:29761042-29761092	Jurkat	blood:	n/a
43	chr6:29761044-29761094	K562	blood:	n/a
44	chr6:29761044-29761094	ProgFib	skin:	n/a
45	chr6:29761044-29761094	AG09319	gingival:	n/a
46	chr6:29761042-29761092	SAEC	small airway:	n/a
47	chr6:29761042-29761092	AG04449	skin:	fetal
48	chr6:29761042-29761092	GM12891	blood:	n/a
49	chr6:29761042-29761092	HRE	kidney:	n/a
50	chr6:29761042-29761092	HEEpiC	esophagus:	n/a

(count:1 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:29760873..29763751-chr6:29786445..29789008,2	MCF-7	breast:

No data

Variant related genes	Relation type
HCG4	TF binding region
HCG4	CpG island

Extended variants
information (count: 140 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:119)

rs_ID	r²[population]
rs1362068	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1362069	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1362070	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1610634	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1610640	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1610641	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1610642	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1610645	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1610647	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1610651	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1610656	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1610669	0.84[EUR][1000 genomes]
rs1610670	0.84[EUR][1000 genomes]
rs1610701	0.84[EUR][1000 genomes]
rs1610703	0.84[EUR][1000 genomes]
rs1610712	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1610716	0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1610717	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1610718	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1610722	0.98[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1610723	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1610724	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1610725	0.85[EUR][1000 genomes]
rs1610726	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1611178	0.90[EUR][1000 genomes]
rs1611193	0.90[EUR][1000 genomes]
rs1611194	0.90[EUR][1000 genomes]
rs1611199	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1611200	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1611204	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1611206	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1611207	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1611211	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1611213	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1611217	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1611218	0.98[AFR][1000 genomes];0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1611219	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1611220	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1611221	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1611222	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1611223	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1611227	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1611228	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1611230	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1611234	0.83[ASN][1000 genomes]
rs1611241	0.87[ASN][1000 genomes]
rs1611246	0.87[ASN][1000 genomes]
rs1611247	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1611248	0.84[ASN][1000 genomes]
rs1611249	0.85[ASN][1000 genomes]
rs1611252	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1611259	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1611260	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1611265	0.87[ASN][1000 genomes]
rs1611266	0.87[ASN][1000 genomes]
rs1611267	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1614309	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1615251	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1615839	0.83[AFR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1618670	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1630062	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1632982	0.87[EUR][1000 genomes]
rs1632995	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1632996	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1633003	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633010	0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1633014	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633016	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633018	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633019	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1633020	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633024	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1633027	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1633028	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633030	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633031	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1633032	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633033	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1633034	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1633035	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1633037	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1736976	0.87[EUR][1000 genomes]
rs1736977	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs1736984	0.84[AFR][1000 genomes];0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs1736998	0.88[EUR][1000 genomes]
rs1736999	0.81[ASN][1000 genomes]
rs1737003	0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1737004	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1737006	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1737009	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1737010	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1737011	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1737012	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1737014	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1737017	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1737018	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1737019	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737020	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737021	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1737028	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1737029	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737031	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737036	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737038	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737042	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737047	0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1737049	0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2394171	0.85[ASN][1000 genomes]
rs2517921	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2735042	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2844839	0.91[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2844840	0.82[ASN][1000 genomes]
rs2893981	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3129185	0.81[ASN][1000 genomes]
rs739780	0.83[EUR][1000 genomes]
rs885937	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs909720	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs909722	0.80[EUR][1000 genomes]
rs9258374	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv20940	chr6:29653954-29923410	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
2	nsv428475	chr6:29659525-29763392	Strong transcription Weak transcription Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv428139	chr6:29659525-29892317	Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	41 gene(s)	inside rSNPs	diseases
4	nsv427749	chr6:29659525-29975144	Enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
5	nsv508397	chr6:29663132-29761448	Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
6	esv1794141	chr6:29670915-29765814	Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
7	nsv10809	chr6:29692573-29794119	Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
8	nsv883532	chr6:29703262-29814963	Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
9	esv3441842	chr6:29715749-29942950	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
10	esv11180	chr6:29729381-29800066	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
11	esv3332677	chr6:29733187-29961463	Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
12	esv3423001	chr6:29733216-29878601	Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	32 gene(s)	inside rSNPs	diseases
13	esv3475027	chr6:29733297-29922699	Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
14	esv3475028	chr6:29733297-29922699	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
15	esv3420260	chr6:29734457-29835593	Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases
16	esv3330285	chr6:29736281-29881328	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	31 gene(s)	inside rSNPs	diseases
17	nsv883537	chr6:29746023-29767611	Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Weak transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
18	nsv883539	chr6:29748206-29780529	Bivalent/Poised TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
19	esv3396224	chr6:29754243-29888093	Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
20	nsv965702	chr6:29758408-29798943	Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
21	esv3430372	chr6:29759523-29974277	Genic enhancers Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29759200-29761200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr6:29759600-29761200	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
3	chr6:29759800-29761200	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
4	chr6:29760400-29764400	Weak transcription	Hela-S3	cervix
5	chr6:29760600-29761200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
6	chr6:29760600-29761200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
7	chr6:29760600-29761200	Enhancers	Lung	lung
8	chr6:29760800-29761200	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
9	chr6:29760800-29761200	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
10	chr6:29760800-29761200	Bivalent Enhancer	Primary hematopoietic stem cells	blood
11	chr6:29760800-29761200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
12	chr6:29760800-29761200	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
13	chr6:29760800-29761200	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
14	chr6:29760800-29761200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
15	chr6:29760800-29761400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr6:29761000-29761200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
17	chr6:29761000-29761200	Bivalent Enhancer	H9 Cell Line	embryonic stem cell
18	chr6:29761000-29761200	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
19	chr6:29761000-29761200	Bivalent/Poised TSS	Primary B cells from cord blood	blood
20	chr6:29761000-29761200	Bivalent Enhancer	Primary B cells from peripheral blood	blood
21	chr6:29761000-29761200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
22	chr6:29761000-29761200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
23	chr6:29761000-29761200	Flanking Bivalent TSS/Enh	Primary T regulatory cells fromperipheralblood	blood
24	chr6:29761000-29761200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
25	chr6:29761000-29761200	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr6:29761000-29761200	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr6:29761000-29761200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr6:29761000-29761200	Enhancers	Brain Anterior Caudate	brain
29	chr6:29761000-29761200	Bivalent Enhancer	Brain Hippocampus Middle	brain
30	chr6:29761000-29761200	Bivalent Enhancer	Brain Substantia Nigra	brain
31	chr6:29761000-29761200	Bivalent Enhancer	Colon Smooth Muscle	Colon
32	chr6:29761000-29761200	Bivalent Enhancer	Rectal Mucosa Donor 29	rectum
33	chr6:29761000-29761200	Enhancers	Right Ventricle	heart
34	chr6:29761000-29761200	Bivalent/Poised TSS	Skeletal Muscle Male	skeletal muscle
35	chr6:29761000-29761200	Bivalent Enhancer	Thymus	Thymus
36	chr6:29761000-29761200	Enhancers	Spleen	Spleen
37	chr6:29761000-29761200	Enhancers	HMEC	breast
38	chr6:29761000-29761200	Bivalent Enhancer	Monocytes-CD14+_RO01746	blood
39	chr6:29761000-29761200	Bivalent Enhancer	NHDF-Ad	bronchial
40	chr6:29761000-29761200	Enhancers	NHEK	skin
41	chr6:29761000-29761400	Enhancers	Primary T helper naive cells from peripheral blood	blood
42	chr6:29761000-29761400	Enhancers	Primary T helper cells fromperipheralblood	blood
43	chr6:29761000-29761400	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
44	chr6:29761000-29761400	Enhancers	Left Ventricle	heart
45	chr6:29761000-29761600	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
46	chr6:29761000-29761600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
47	chr6:29761000-29761800	Enhancers	Pancreas	Pancrea
48	chr6:29761000-29762000	Bivalent Enhancer	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr6:29761000-29763000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr6:29761000-29765200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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