Variant report

Variant rs1611200
Chromosome Location chr6:29759633-29759634
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29758400-29760000 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr6:29758600-29759800 Bivalent Enhancer Stomach Mucosa stomach
3 chr6:29758600-29760600 Active TSS Placenta Amnion Placenta Amnion
4 chr6:29759000-29759800 Active TSS Brain Inferior Temporal Lobe brain
5 chr6:29759000-29760600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr6:29759000-29760800 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:29759000-29761000 Active TSS Pancreatic Islets Pancreatic Islet
8 chr6:29759200-29759800 Active TSS Duodenum Smooth Muscle Duodenum
9 chr6:29759200-29759800 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
10 chr6:29759200-29760000 Bivalent/Poised TSS Stomach Smooth Muscle stomach
11 chr6:29759200-29760800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr6:29759200-29760800 Active TSS Brain Hippocampus Middle brain
13 chr6:29759200-29760800 Active TSS NHEK skin
14 chr6:29759200-29761000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
15 chr6:29759200-29761000 Active TSS Brain Angular Gyrus brain
16 chr6:29759200-29761200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr6:29759400-29759800 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:29759400-29759800 Enhancers Primary T helper cells PMA-I stimulated --
19 chr6:29759400-29759800 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr6:29759400-29760000 Active TSS HMEC breast
21 chr6:29759400-29760400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:29759400-29760800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr6:29759400-29760800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr6:29759400-29760800 Active TSS Brain Anterior Caudate brain
25 chr6:29759400-29760800 Active TSS Rectal Mucosa Donor 31 rectum
26 chr6:29759400-29761000 Active TSS H9 Cell Line embryonic stem cell
27 chr6:29759400-29761000 Active TSS NHDF-Ad bronchial
28 chr6:29759600-29759800 Flanking Bivalent TSS/Enh HUES6 Cell Line embryonic stem cell
29 chr6:29759600-29759800 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
30 chr6:29759600-29759800 Bivalent Enhancer Primary monocytes fromperipheralblood blood
31 chr6:29759600-29759800 Bivalent Enhancer Primary B cells from peripheral blood blood
32 chr6:29759600-29759800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr6:29759600-29759800 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr6:29759600-29759800 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr6:29759600-29759800 Active TSS Primary T regulatory cells fromperipheralblood blood
36 chr6:29759600-29759800 Enhancers Primary Natural Killer cells fromperipheralblood blood
37 chr6:29759600-29759800 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr6:29759600-29759800 Bivalent Enhancer Ganglion Eminence derived primary cultured neurospheres brain
39 chr6:29759600-29759800 Bivalent Enhancer Primary mononuclear cells fromperipheralblood Blood
40 chr6:29759600-29759800 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
41 chr6:29759600-29759800 Flanking Active TSS Pancreas Pancrea
42 chr6:29759600-29759800 Bivalent/Poised TSS NHLF lung
43 chr6:29759600-29760000 Flanking Bivalent TSS/Enh H1 Cell Line embryonic stem cell
44 chr6:29759600-29760000 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:29759600-29760000 Flanking Active TSS Primary T helper cells fromperipheralblood blood
46 chr6:29759600-29760000 Enhancers Small Intestine intestine
47 chr6:29759600-29760200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
48 chr6:29759600-29760200 Flanking Bivalent TSS/Enh Colonic Mucosa Colon
49 chr6:29759600-29760200 Flanking Active TSS Spleen Spleen
50 chr6:29759600-29760400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood

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