Variant report
Variant | rs1621030 |
---|---|
Chromosome Location | chr1:223549922-223549923 |
allele | A/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:223536038..223539069-chr1:223546089..223550790,4 | MCF-7 | breast: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000143502 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10907375 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs11261269 | 0.80[ASN][1000 genomes] |
rs11579995 | 0.82[ASN][1000 genomes] |
rs12064476 | 0.85[ASN][1000 genomes] |
rs12094897 | 0.88[ASN][1000 genomes] |
rs12405882 | 0.80[ASN][1000 genomes] |
rs1400964 | 0.95[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs17162005 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs17163836 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs1914612 | 0.86[AMR][1000 genomes];0.83[ASN][1000 genomes] |
rs2298063 | 0.82[ASN][1000 genomes] |
rs2353204 | 0.80[ASN][1000 genomes] |
rs28788929 | 0.85[ASN][1000 genomes] |
rs28897212 | 0.95[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs35345617 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs35727959 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs35736338 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs59584296 | 0.80[ASN][1000 genomes] |
rs61838232 | 0.82[AMR][1000 genomes] |
rs61838244 | 0.81[AMR][1000 genomes] |
rs6661314 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs6677044 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs6679661 | 0.81[AMR][1000 genomes];0.82[ASN][1000 genomes] |
rs6682552 | 0.82[ASN][1000 genomes] |
rs6689850 | 0.82[ASN][1000 genomes] |
rs6700523 | 0.86[AMR][1000 genomes];0.85[ASN][1000 genomes] |
rs6701453 | 0.85[ASN][1000 genomes] |
No data |