Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10800169	0.84[ASN][1000 genomes]
rs10800170	0.84[ASN][1000 genomes]
rs10800171	0.84[ASN][1000 genomes]
rs10918311	0.86[EUR][1000 genomes]
rs10918313	0.84[ASN][1000 genomes]
rs10918314	0.84[ASN][1000 genomes]
rs12123400	0.86[EUR][1000 genomes]
rs12727124	0.84[ASN][1000 genomes]
rs12730968	0.93[EUR][1000 genomes]
rs12730991	0.84[ASN][1000 genomes]
rs1663839	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1768902	0.95[ASN][1000 genomes]
rs1934272	0.96[EUR][1000 genomes]
rs1934273	0.96[EUR][1000 genomes]
rs1934274	0.96[EUR][1000 genomes]
rs2153261	0.84[ASN][1000 genomes]
rs2153262	0.84[ASN][1000 genomes]
rs2185267	0.84[ASN][1000 genomes]
rs2349104	0.84[ASN][1000 genomes]
rs522854	0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv872509	chr1:165885147-165917109	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165858600-165902400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr1:165880800-165902600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr1:165894400-165902400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr1:165894600-165902400	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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