Variant report

No data

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:171598979..171601021-chr2:171601414..171603949,2	K562	blood:
2	chr2:171586428..171588996-chr2:171600958..171602689,2	K562	blood:
3	chr2:171598820..171602992-chr2:171626434..171628904,5	K562	blood:
4	chr2:171594157..171598805-chr2:171599016..171605066,9	K562	blood:
5	chr2:171595899..171597682-chr2:171601375..171604248,2	MCF-7	breast:
6	chr2:171598608..171603078-chr2:171626081..171629316,7	K562	blood:
7	chr2:171599691..171602406-chr2:171784049..171787334,4	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs17694726	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17700577	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17700773	0.89[AMR][1000 genomes]
rs17751683	0.89[AMR][1000 genomes]
rs1894918	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2883886	0.87[EUR][1000 genomes]
rs41393845	0.89[AMR][1000 genomes]
rs45465192	0.89[AMR][1000 genomes]
rs45473292	0.89[AMR][1000 genomes]
rs45486908	0.89[AMR][1000 genomes]
rs4667653	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4667654	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4667655	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4667659	0.85[AMR][1000 genomes]
rs4668307	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4668310	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4668311	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4668318	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4668319	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4668322	0.89[AMR][1000 genomes]
rs56852746	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:171574000-171620800	Weak transcription	Pancreas	Pancrea
2	chr2:171597600-171603800	Weak transcription	HMEC	breast
3	chr2:171597800-171604000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr2:171598000-171603800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr2:171600400-171602400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
6	chr2:171600800-171602400	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr2:171600800-171604000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr2:171601000-171602200	Enhancers	Fetal Intestine Small	intestine
9	chr2:171601000-171603800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr2:171601200-171602600	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr2:171601600-171604200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr2:171601600-171606400	Weak transcription	Gastric	stomach
13	chr2:171601800-171602000	Enhancers	K562	blood
14	chr2:171601800-171604200	Weak transcription	Stomach Mucosa	stomach

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