Variant report
| Variant | rs16828416 |
|---|---|
| Chromosome Location | chr1:173552703-173552704 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:21)
| rs_ID | r2[population] |
|---|---|
| rs10157668 | 1.00[GIH][hapmap];1.00[MEX][hapmap] |
| rs10158034 | 1.00[GIH][hapmap] |
| rs10737302 | 1.00[GIH][hapmap];1.00[MEX][hapmap] |
| rs12059068 | 1.00[GIH][hapmap] |
| rs12065033 | 1.00[GIH][hapmap] |
| rs12081220 | 1.00[GIH][hapmap] |
| rs12087885 | 1.00[GIH][hapmap] |
| rs16846052 | 1.00[GIH][hapmap] |
| rs16846173 | 1.00[GIH][hapmap];1.00[MEX][hapmap] |
| rs16846220 | 1.00[GIH][hapmap] |
| rs16846301 | 1.00[ASW][hapmap];1.00[GIH][hapmap];0.97[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.92[YRI][hapmap];0.87[AFR][1000 genomes];0.89[AMR][1000 genomes] |
| rs1885679 | 0.81[LWK][hapmap];1.00[MEX][hapmap] |
| rs2013387 | 1.00[GIH][hapmap] |
| rs4354572 | 1.00[GIH][hapmap];1.00[MEX][hapmap] |
| rs4494170 | 1.00[GIH][hapmap];1.00[MEX][hapmap] |
| rs4916221 | 1.00[GIH][hapmap] |
| rs56365275 | 0.84[AFR][1000 genomes];0.89[AMR][1000 genomes] |
| rs6678784 | 1.00[GIH][hapmap] |
| rs74129115 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs74129121 | 0.96[AFR][1000 genomes];0.89[AMR][1000 genomes] |
| rs74129122 | 0.96[AFR][1000 genomes];0.89[AMR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
